Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., ribokinase (RefSeq) from Shewanella loihica PV-4

 Score =  375 bits (964), Expect = e-109
 Identities = 190/302 (62%), Positives = 232/302 (76%)

Query: 1   MSHILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDF 60
           M+ +L++GSANADHVMN E+LP  GQTL SR YRLEHGGKGANQAVA ARL   ++RVDF
Sbjct: 1   MTRLLILGSANADHVMNLEHLPSAGQTLMSRGYRLEHGGKGANQAVAAARLSKDETRVDF 60

Query: 61  ICHLGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHL 120
           ICHLG+D+IG  M  +W +DGI   GIT  D+  TGTAMIFVAD GEN IG++AGANA L
Sbjct: 61  ICHLGRDAIGQAMAQAWQQDGIMPYGITYTDDQPTGTAMIFVADKGENIIGVSAGANATL 120

Query: 121 TPLELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKW 180
           TP  LE H  L   A YLL+QLETP  TV +AL+ AK+ G+TT+LNPAPA     D  + 
Sbjct: 121 TPEALEAHLELIEKADYLLVQLETPAVTVLDALKHAKKHGVTTILNPAPAMVIGKDLFRL 180

Query: 181 VDIITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLI 240
           VD+ITPNETEAEA+TGIEV  E+ A++AAQ LHQ G  TV+ITLG +GA +S+  +  LI
Sbjct: 181 VDVITPNETEAEAITGIEVTDEQSARMAAQMLHQFGPQTVIITLGKQGALLSTKDYCALI 240

Query: 241 PALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSE 300
           P + V+A+DTVAAGDTFNGAL+V L EG S+  AV+FA+ A+AI+VTR GAQRAIPYR E
Sbjct: 241 PGVQVKAVDTVAAGDTFNGALMVALGEGKSVEEAVAFAHRAAAISVTRAGAQRAIPYRHE 300

Query: 301 VS 302
           ++
Sbjct: 301 LA 302