Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 320 a.a., deoxyribose kinase (EC 2.7.1.15) (from data) from Paraburkholderia bryophila 376MFSha3.1

 Score =  186 bits (473), Expect = 5e-52
 Identities = 111/302 (36%), Positives = 171/302 (56%), Gaps = 6/302 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++++G    D       +P+ G+T+   ++ +  GGKG+NQAVA AR     + V F   
Sbjct: 11  VVILGIYVTDLTFRAARMPLVGETIAGSAFAMGPGGKGSNQAVAAARA---GAEVVFCTR 67

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADN-GENAIGIAAGANAHLTP 122
           +G D+ G+  + +W ++GI A   ++V+ VSTG A IFV D  G NAI +AAGA   L+ 
Sbjct: 68  IGNDAFGSIAQATWAREGITARA-SVVEGVSTGAAHIFVDDTTGMNAIIVAAGAAGTLSA 126

Query: 123 LELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVD 182
            +++   A  A ++  + QLE P       L++A++ G+TTV NPAPA   + D     D
Sbjct: 127 ADVDAIEADIAGSRVFVTQLEQPLAAARRGLEVARKHGVTTVFNPAPALPLDDDIFPLCD 186

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
            ITPNETEA ALTG+ + + +DA+ AA  L  +G+ TV++TLG  GA +     +  +PA
Sbjct: 187 YITPNETEAAALTGVPIANVDDARRAADVLLAKGVGTVIVTLGEGGALLHDATQSIWLPA 246

Query: 243 LTVQA-IDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
               A ++T  AGD F G     L+ G    +A+ F  A + I+VTR G   ++P  +EV
Sbjct: 247 FRCGAVVETAGAGDGFTGGFAAALARGEDAISAMRFGCALAGISVTRAGTAPSMPTLAEV 306

Query: 302 SR 303
           +R
Sbjct: 307 NR 308