Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 328 a.a., deoxyribose kinase (EC 2.7.1.15) (from data) from Burkholderia phytofirmans PsJN

 Score =  181 bits (459), Expect = 2e-50
 Identities = 110/302 (36%), Positives = 167/302 (55%), Gaps = 6/302 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           ++++G    D       +P  G+T+   ++ +  GGKG+NQAVA AR+    + V F   
Sbjct: 13  VVILGIYVTDLTFRAGRMPQIGETIAGTAFAMGPGGKGSNQAVAAARV---GADVVFCTR 69

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADN-GENAIGIAAGANAHLTP 122
           +G D+ G+  R +W  +GI A   +++D VSTG A IFV DN G NAI +A+GA   +  
Sbjct: 70  IGNDAFGSIARATWAAEGITARA-SVIDGVSTGAAHIFVDDNTGMNAIIVASGAAGTMEA 128

Query: 123 LELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPAATQELDYLKWVD 182
            +++   A  A A+  + QLE P       L++A++ G+ TV NPAPA   +       D
Sbjct: 129 ADVDAIEADIAAARVFVTQLEQPLAAARRGLEVARKHGVITVFNPAPAMPLDDAIFPLCD 188

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGLIPA 242
            ITPNETEA ALTG+ + + +DA+ AA  L  +G+ T +ITLG  GA + S   + L+PA
Sbjct: 189 YITPNETEATALTGVPIANADDARRAADVLLAKGVGTAIITLGEGGALLHSANQSLLVPA 248

Query: 243 LTV-QAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
               + ++T  AGD F G     L+ G     A+ F  A + I+VTR G   ++P   EV
Sbjct: 249 YHCGRVVETAGAGDGFTGGFAAALARGDDAITALRFGCALAGISVTRPGTAPSMPTLDEV 308

Query: 302 SR 303
           ++
Sbjct: 309 NQ 310