Pairwise Alignments

Query, 303 a.a., ribokinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 310 a.a., ribokinase from Burkholderia phytofirmans PsJN

 Score =  213 bits (543), Expect = 3e-60
 Identities = 123/300 (41%), Positives = 177/300 (59%), Gaps = 5/300 (1%)

Query: 4   ILVIGSANADHVMNFEYLPVPGQTLKSRSYRLEHGGKGANQAVACARLCLPDSRVDFICH 63
           +LV+GS N D V    +LP PG+T+    +    GGKG NQAVA AR+    ++V  +  
Sbjct: 10  VLVVGSINTDLVARAPHLPRPGETIGGHEFSQVAGGKGGNQAVAAARI---GAQVAMVGC 66

Query: 64  LGQDSIGNEMRDSWLKDGIQAEGITLVDNVSTGTAMIFVADNGENAIGIAAGANAHLTPL 123
           +G+D+ G +       +GI   GI +     TG AM+ V+D+G+N I + AG+N  LTP 
Sbjct: 67  VGKDANGAQRVKDLEAEGIDCSGIEVHPGQPTGVAMVTVSDDGQNTIVVVAGSNGELTPE 126

Query: 124 ELEKHYALFANAQYLLIQLETPTETVSNALQMAKRLGITTVLNPAPA-ATQELDYLKWVD 182
            + +H A       ++ QLETP ++V   L +A+RLG  TVLNPAPA      ++L  VD
Sbjct: 127 SVARHEAAIKACDVVVCQLETPWDSVHATLALARRLGKITVLNPAPATGPLPAEWLPLVD 186

Query: 183 IITPNETEAEALTGIEVKHEEDAKLAAQWLHQQGITTVVITLGSKGAFISSPGFTGL-IP 241
            + PNE EA  L G+ V+ +  A+ AA  L Q G   V++TLG++GA++   G  G+  P
Sbjct: 187 YLVPNEVEAAILAGLPVESQSGARRAATELQQGGARNVIVTLGAQGAYLLVEGGEGMHFP 246

Query: 242 ALTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVSFANAASAITVTREGAQRAIPYRSEV 301
           A  VQA+DT AAGDTF G     L+    + +A+S A  A++I+VTR GAQ +IP R+EV
Sbjct: 247 APQVQAVDTTAAGDTFIGVFAAQLASRQPLESAISLAQRAASISVTRAGAQPSIPTRAEV 306