Pairwise Alignments

Query, 962 a.a., glycine cleavage system P protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 954 a.a., glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit from Pseudomonas syringae pv. syringae B728a

 Score = 1130 bits (2922), Expect = 0.0
 Identities = 561/951 (58%), Positives = 714/951 (75%), Gaps = 14/951 (1%)

Query: 15  FLRRHIGPDSSQQQEMLNYVGAESLDDLTAQIVPESIRLSQELSIGDSCGEAEGIAYIRG 74
           F+ RHIGP ++ +  ML  +G +S++ L+  ++PESI+ +  L++     EA+ +A I+ 
Sbjct: 13  FIARHIGPRAADELAMLQTLGFDSIEALSESVIPESIKGTSVLNLPAGQSEADALASIKA 72

Query: 75  LAKQNQVFKSYIGMGYYGTQVPNVILRNVLENPGWYTAYTPYQPEIAQGRLEAILNFQQV 134
           +A +NQ+FK+YIG GYY T  P  ILRN+LENP WYTAYTPYQPEI+QGRLE++LNFQ +
Sbjct: 73  IASKNQLFKTYIGQGYYNTHTPAPILRNLLENPAWYTAYTPYQPEISQGRLESLLNFQTL 132

Query: 135 SMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANIFFVADDVFPQTLDVVKTRAEC 194
             DLTGL +A+ASLLDEATAAAEAM   KR+SK K +  FF +    PQTLDV++TRAE 
Sbjct: 133 ISDLTGLPIANASLLDEATAAAEAMTFCKRLSKNKASQQFFASSHCHPQTLDVLRTRAEP 192

Query: 195 FGFEVVVGPASEAVN-HELFGALFQYSNRFGQITDFTDLFAELRAKNVIVTVAADIMSLV 253
            G  VVV    E  +  + FGAL QY    G + D+ +L     A N +V VAAD+++L 
Sbjct: 193 LGITVVVADEHELGDVSDYFGALLQYPASNGDVFDYRELVERFHAANALVAVAADLLALT 252

Query: 254 LLKSPGSMGADVVFGSAQRFGVPMGFGGPHAAFFVARDEHKRSMPGRIIGVSKDTRGNRA 313
           LL  PG  GADV  GSAQRFGVP+GFGGPHAA+F  RD  KR MPGR++GVS D  G +A
Sbjct: 253 LLTPPGEFGADVAIGSAQRFGVPLGFGGPHAAYFSTRDAFKRDMPGRLVGVSVDRHGKQA 312

Query: 314 LRMAMQTREQHIRREKANSNICTAQILLANMASFYAVFHGPQGLKTIASRINRFADILAA 373
           LR+AMQTREQHIRREKA SNICTAQ+LLAN+AS YAV+HGP+GL  IA+R+++   ILA 
Sbjct: 313 LRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPRGLTQIANRVHQLTAILAE 372

Query: 374 GLQAKGVSLVNNTWFDTISIKGLD-VAAVNARALAAEMNLRFDADGIVGVSLDETTIRTD 432
           GL   G++     +FD++++   D  AA++A A A  +NLR   D  +G+SLDETT ++ 
Sbjct: 373 GLSTLGLNAEQAFFFDSLTLHTGDRTAALHAAARARHINLREIDDQRLGLSLDETTSQSA 432

Query: 433 IDALFEVILGAGHGL-DVAALDAQIVAQGSQSIPASLVREDAILSHPTFNRYQSETEMMR 491
           ++ L+ +    G  L D AAL   + ++    +PA L+R+ AILSHP FNRY SETE+MR
Sbjct: 433 VETLWAIFANDGQSLPDFAALADSVQSR----LPAGLLRQSAILSHPVFNRYHSETELMR 488

Query: 492 YIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQAKGYTQLIE 551
           Y+++L  KDLAL+ +MI LGSCTMKLNAA EMIPV+W EF N+HPF P +Q+ GY QL +
Sbjct: 489 YLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEFGNLHPFAPAEQSAGYQQLTD 548

Query: 552 ELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIRKYHESRGEAHRNICLIPQSAHGTNPA 611
           EL + L   TGYDA+ +QPN+G+QGEYAGLLAIR YH+SRG+ HR+ICLIP SAHGTNPA
Sbjct: 549 ELEAMLCAATGYDAISLQPNAGSQGEYAGLLAIRAYHQSRGDEHRDICLIPSSAHGTNPA 608

Query: 612 SAQLAGMQVVVTACDKQGNVDLEDLKAKAAEVAENLSCIMITYPSTHGVYEETVREICNI 671
           +A +AGM+VVVTACD +GNVD+EDL+AKA +  + L+ IMITYPSTHGV+EE +REIC I
Sbjct: 609 TANMAGMRVVVTACDARGNVDIEDLRAKAVQHRDQLAAIMITYPSTHGVFEEGIREICGI 668

Query: 672 VHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGPGMGPIGVKAHL 731
           VH +GGQVY+DGANMNA VGL +PG  G DVSHLNLHKTF IPHGGGGPG+GPIGVK+HL
Sbjct: 669 VHDNGGQVYIDGANMNAMVGLCAPGKFGGDVSHLNLHKTFCIPHGGGGPGVGPIGVKSHL 728

Query: 732 APFVAGHVVVKPGRESDNNGAVSAAPYGSAGILPISWMYIKLLGSKGLKKSTQTALLNAN 791
           APF+ GH      R     GAV AAP+GSA ILPI+WMYI+++G +GLK+++Q A+LNAN
Sbjct: 729 APFMPGH-----ARMERKEGAVCAAPFGSASILPITWMYIRMMGGEGLKRASQLAILNAN 783

Query: 792 YVMKKLSEHYPVLFRGRNDRVAHECIIDLRPIKEASGVTEMDIAKRLNDYGFHAPTMSFP 851
           Y+ ++L EHYPVL+ G N  VAHECI+DLRPIK++SG++  D+AKRL D+GFHAPTMSFP
Sbjct: 784 YISRRLEEHYPVLYTGSNGLVAHECILDLRPIKDSSGISVDDVAKRLIDFGFHAPTMSFP 843

Query: 852 VAGTLMIEPTESESKVELDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAPHTMADIMDS 911
           VAGTLMIEPTESES+ ELDRF DAM+ IR EI  VE G    D+NPL NAPHT A+I+  
Sbjct: 844 VAGTLMIEPTESESREELDRFCDAMIKIREEIRAVENGTLDKDDNPLKNAPHTAAEIVGQ 903

Query: 912 AFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVPLSDYE 962
              S PYSRE AV+P  ++  NK+WP V R+D+V+GDRNL CAC  + +Y+
Sbjct: 904 W--SHPYSREQAVYPVDSLIENKYWPPVGRVDNVFGDRNLVCACPSIENYQ 952