Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC/XylS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 285 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  113 bits (282), Expect = 5e-30
 Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 14/268 (5%)

Query: 5   EHINYWRHPNLSGIELSQAEFTHFSFDKHVHLDYHLGVVTQGAQQFINKGSRYQLGQHGL 64
           E   +WR P   G+E   A F    F  H H  + +G +  G+Q    KG R Q G   L
Sbjct: 19  ERTRFWRDPRFKGMECLSATFITHEFAPHAHDTFSIGAIEAGSQISTIKGERSQTGPGDL 78

Query: 65  STLNPDETHDGQSRDAEGYRVKVMSIPVDFMNAISQEMG----QATHFFNAPMIDDSALY 120
             +NPDE HDG     EGYR +++  P D +  I +++     + T  F+  ++ D  L 
Sbjct: 79  YLINPDEIHDGHP-GHEGYRYRMVYPPTDLLVEILEDVTGRSFKGTPSFSRLLLTDRELA 137

Query: 121 QYFIQLHNLLTQEQCTELAAESHLLNFMQLLLTRHPAG---TLKLGQDQGLSLQQLNLIK 177
             F + H  L  +  T L A+  +  F+  L  RH       L+  +   +   +  L++
Sbjct: 138 LGFHRAHRALEGKVGT-LEADESMFGFLARLFERHGNAIIVPLQTRESSAVHRARDYLVE 196

Query: 178 QKIHDEPWQNTQLEGLANEVNLSKFQFLRQFKQATGMTPHAYLKRVRLELAKKSLTHGTL 237
              HD       LE LA    LS+   +R F++   +TPHA+L   R+  AK  L  G  
Sbjct: 197 NYTHD-----IGLEELAKLAGLSRAHLIRAFRKEFHITPHAFLTDKRVREAKALLRRGWS 251

Query: 238 VVDVAQQLGFFDQSHLNKAFKQAFLLSP 265
             D A   GF DQ+H ++ FK    ++P
Sbjct: 252 AADTAYHCGFADQAHFSRHFKARTGVTP 279