Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC/XylS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 276 a.a., transcriptional regulator, AraC family from Paraburkholderia bryophila 376MFSha3.1

 Score =  125 bits (313), Expect = 1e-33
 Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 5/264 (1%)

Query: 9   YWRHPNLSGIELSQAEFTHFSFDKHVHLDYHLGVVTQGAQQFINKGSRYQLGQHGLSTLN 68
           YWR P L G +L  AE+    F  H H  Y + V+  GA+ +  +GS Y     G+  +N
Sbjct: 13  YWRTPLLPGADLLTAEYHDHEFAPHWHDAYTIPVIVAGAEGYRYRGSDYVAEAGGVPIIN 72

Query: 69  PDETHDGQSRDAEGYRVKVMSIPVDFMNAISQEMG---QATHFFNAPMIDDSALYQYFIQ 125
           P E H G      G+R +V   PV F++ ++ ++    Q   +F   +I D  L      
Sbjct: 73  PGELHTGSKAVEAGWRYRVTYAPVQFIHELTDQIAGKPQPLPWFAPGVIHDPDLAVRLAN 132

Query: 126 LHNLLTQEQCTELAAESHLLNFMQLLLTRHPAGTLKLGQDQGLSLQQLNLIKQKIHDEPW 185
            H +L +     LAAE+ +L+ +  LL R+ + TL           ++ ++K+++  +  
Sbjct: 133 AHRML-EAGSDALAAEAAMLDALSTLLVRY-SQTLPEPSRMAADDTRVAVMKERLAGDLL 190

Query: 186 QNTQLEGLANEVNLSKFQFLRQFKQATGMTPHAYLKRVRLELAKKSLTHGTLVVDVAQQL 245
           +   L  +A    LS F   R F +ATG+ PHA+  ++RL+ A   L  G  V DVA   
Sbjct: 191 EPVTLADVAQAAGLSPFHAARLFNRATGLPPHAWRNQIRLQRALAPLRAGVAVTDVAAAS 250

Query: 246 GFFDQSHLNKAFKQAFLLSPVQFQ 269
           GF DQSH  + F++ F + P ++Q
Sbjct: 251 GFTDQSHFTRHFRRMFGVPPGRWQ 274