Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC/XylS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 281 a.a., AraC-type DNA-binding protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  112 bits (280), Expect = 9e-30
 Identities = 75/266 (28%), Positives = 124/266 (46%), Gaps = 9/266 (3%)

Query: 9   YWRHPNLSGIEL-SQAEFTHFSFDKHVHLDYHLGVVTQGAQQFINKGSRYQLGQHGLSTL 67
           +WR   L  IE  S  +     + +H H  + +G VT G   ++N+ +R   G   +  +
Sbjct: 19  FWRSEALPYIEARSIDDGREICYARHSHETFSIGAVTGGRSLYVNRHAREWTGAGAVVLM 78

Query: 68  NPDETHDGQSRDAEGYRVKVMSIPVDFMNAISQEMG----QATHFFNAPMIDDSALYQYF 123
           NPD+ H       E +  +++ + V ++  +  E+G     A   F+  M  D+AL+   
Sbjct: 79  NPDDVHACNPVADECWSYRMLHVDVAWLTGLQHELGFSENHAFRAFSQIMTTDTALFNAL 138

Query: 124 IQLHNLLTQEQCTELAAESHLLNFMQLLLTRHPAGTLKLGQDQGLSLQQLNLIKQKIHDE 183
             LH +L   +   L  +S  + F   +  +H      L  D   + +QL    + I + 
Sbjct: 139 NGLHAILVDAKTDLLRKQSAAIAFFSEV--QHRLNPAPLSDDD--ASRQLARAAEFIAEN 194

Query: 184 PWQNTQLEGLANEVNLSKFQFLRQFKQATGMTPHAYLKRVRLELAKKSLTHGTLVVDVAQ 243
                +LE + N   LS    +R FKQ  GMTPHAYL   R++ ++  L  G L+ DVA 
Sbjct: 195 CRSPLKLEDICNAAGLSASHLIRAFKQRYGMTPHAYLINRRIQYSRAQLKRGRLIADVAL 254

Query: 244 QLGFFDQSHLNKAFKQAFLLSPVQFQ 269
             GF DQ+HL + FK+    +P Q++
Sbjct: 255 DAGFADQAHLQRTFKRLVAATPGQYR 280