Pairwise Alignments

Query, 273 a.a., transcriptional regulator, AraC/XylS family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 285 a.a., transcriptional regulator, AraC family from Paraburkholderia bryophila 376MFSha3.1

 Score =  106 bits (265), Expect = 5e-28
 Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 9/260 (3%)

Query: 16  SGIELSQAEFTHFSFDKHVHLDYHLGVVTQGAQQFINKGSRYQLGQHGLSTLNPDETHDG 75
           +GIE  +A F+  ++D H H D  +G   QG Q+F  + S +         + P   HDG
Sbjct: 23  TGIESLRAHFSGHAYDPHDHDDMLVGYTEQGVQRFRCRRSLHTSVPGRAILIEPGALHDG 82

Query: 76  QSRDAEGYRVKVMSIPVDFMNAISQEMG-----QATHFFNAPMIDDSALYQYFIQLHNLL 130
            + +A G+   ++ +P  ++   ++ +      +    F   ++DDS L     Q    +
Sbjct: 83  HAPEAGGFTYAMLYLPQTWVERATRRLNVPGVQRVDAAFAHTLVDDSGLVDAIRQAFLAI 142

Query: 131 TQEQCTELAAESHLLNFMQLLLTRHPAGTLKLGQDQGLSLQQLNLIKQKIHDEPWQNTQL 190
              +     A    L+ +   L  H  G + +     +S   +  ++  +HD    N  L
Sbjct: 143 YGNEGR--LARDQTLDRLVRRLAGH-LGDIPMTDSMAMSAT-IARVRDFLHDHMDGNVGL 198

Query: 191 EGLANEVNLSKFQFLRQFKQATGMTPHAYLKRVRLELAKKSLTHGTLVVDVAQQLGFFDQ 250
           + LA+   + +F+  R F+QA G +PHAYL R+RL  A++ L +G    +VA ++GF DQ
Sbjct: 199 DELASIAGIDRFRLTRLFQQAFGTSPHAYLVRLRLRAARRLLANGRTPAEVAAEVGFADQ 258

Query: 251 SHLNKAFKQAFLLSPVQFQR 270
           SHL + F++A+ ++P  ++R
Sbjct: 259 SHLGRWFRRAYRMTPAAYRR 278