Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 409 a.a., ammonium transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  658 bits (1698), Expect = 0.0
 Identities = 322/405 (79%), Positives = 357/405 (88%)

Query: 1   MTVSELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMY 60
           +TV+ELR+ALDTF+FLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKN VLYAIAC  Y
Sbjct: 5   ITVTELRYALDTFFFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNFVLYAIACTTY 64

Query: 61  LLVGYNIMYVDNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAE 120
           L+VGYNIMYVDN EGGWLPSFG LIGSQA  A+H+LESDFFFQVVFVATAMS+VSGAVAE
Sbjct: 65  LIVGYNIMYVDNTEGGWLPSFGALIGSQADGADHSLESDFFFQVVFVATAMSVVSGAVAE 124

Query: 121 RMKLWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLL 180
           RMKLWAFL+FS V+T  IYPVEGYWTWG GF+++ GF DFAGSGIVH+ GA+AA+AGVLL
Sbjct: 125 RMKLWAFLIFSAVLTAFIYPVEGYWTWGGGFLSAAGFSDFAGSGIVHLAGASAALAGVLL 184

Query: 181 LGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVF 240
           LGARKGKYG NG++ PIPGSN+P+ATLG FILW GWFGFNGGSQLMVSD  NA++V K+F
Sbjct: 185 LGARKGKYGKNGEIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMVSDFENATSVGKIF 244

Query: 241 VNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVA 300
           +NTN AAA GAI+AL+VCK  WGKADLTM+LNG LAGLVAITADPLSPS L +  IG V+
Sbjct: 245 LNTNAAAAAGAIAALLVCKTTWGKADLTMVLNGALAGLVAITADPLSPSPLYSVAIGAVS 304

Query: 301 GGLVVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANATITAQLTGAAIIFAWV 360
           G LVVFSI+GLD++KIDDPVGAISVHGV GF GLM VPLSNA+AT  AQL GAA+IFAWV
Sbjct: 305 GSLVVFSIIGLDKLKIDDPVGAISVHGVCGFFGLMVVPLSNADATFGAQLLGAAVIFAWV 364

Query: 361 FSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEFVTVK 405
           F AS  VW VLK TMGIRVSEEEE  GMD  DCG+ AYPEFVTVK
Sbjct: 365 FGASLVVWGVLKATMGIRVSEEEEMEGMDMHDCGVGAYPEFVTVK 409