Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 446 a.a., ammonium transporter from Phaeobacter inhibens DSM 17395

 Score =  418 bits (1075), Expect = e-121
 Identities = 214/405 (52%), Positives = 283/405 (69%), Gaps = 12/405 (2%)

Query: 8   FALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNI 67
           F L++  FL+ G LV WMAAGFAMLEAGLVRSKN T  LTKNV L+++A + Y L+GYN+
Sbjct: 40  FILNSLLFLVGGFLVFWMAAGFAMLEAGLVRSKNVTMQLTKNVALFSLAAIFYYLIGYNL 99

Query: 68  MYVDNA-------EGGWLPSFGTLIG---SQAADANHALE-SDFFFQVVFVATAMSIVSG 116
           MY            G W P     +G    QA D ++A   SDFFFQ++F AT  SIVSG
Sbjct: 100 MYPLGTWSIEGVLSGVWGPGVLEAVGITSEQADDYSYASTGSDFFFQLMFCATTASIVSG 159

Query: 117 AVAERMKLWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIA 176
            +AER+KLW FL F +V+T +IYP++  W WG GF+  +GF+DFAGS +VH  G  AA+ 
Sbjct: 160 TMAERVKLWPFLAFVIVLTAVIYPLQASWKWGGGFLDEMGFLDFAGSTVVHSVGGWAALT 219

Query: 177 GVLLLGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAV 236
           G L+LG R GKY   G+  P+PGSNL +ATLG FILW+GWFGFNGGSQL +    + + V
Sbjct: 220 GALILGPRLGKYKA-GKTIPMPGSNLALATLGTFILWLGWFGFNGGSQLAMGTVGDVADV 278

Query: 237 AKVFVNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVI 296
           +++F NTN AAA GA++AL++ ++++ K DLTM+LNG LAGLV+ITA+PL+P+L MA +I
Sbjct: 279 SRIFANTNAAAAGGAVAALLLTQLLFKKPDLTMVLNGALAGLVSITAEPLTPTLGMATLI 338

Query: 297 GLVAGGLVVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANATITAQLTGAAII 356
           G   G +VVF +  LD++KIDD VGAI VH VAG  G + V L+N  A++  QLTG  +I
Sbjct: 339 GAAGGVIVVFVVPMLDKMKIDDVVGAIPVHLVAGIWGTIAVVLTNPEASLVTQLTGIVVI 398

Query: 357 FAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEF 401
             +V  +S  VW +L+   GIRV EE+E NG+D S+ G++AYPEF
Sbjct: 399 ALFVVISSAVVWLILRAVTGIRVGEEDEVNGLDMSELGMEAYPEF 443