Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 401 a.a., ammonia permease from Dechlorosoma suillum PS

 Score =  183 bits (465), Expect = 7e-51
 Identities = 147/415 (35%), Positives = 208/415 (50%), Gaps = 40/415 (9%)

Query: 9   ALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIM 68
           A DT + L+   +V+ M AGFA LE G VR KN    L K +  +A++ + Y  VGY I 
Sbjct: 7   ASDTLFVLLGAIMVLAMHAGFAFLELGTVRRKNQVNALVKILSDFAVSTLAYFFVGYGIA 66

Query: 69  YVDNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAFL 128
           Y  +        F     +   ++ H L + FFF + F A   +I+SG +AER +    L
Sbjct: 67  YGVH--------FFQDAQALMQNSGHDL-TKFFFLLTFAAAIPAIISGGIAERARFNPQL 117

Query: 129 VFSVVMTGIIYPVEGYWTWGKGF------IASLG--FVDFAGSGIVHMTGAAAAIAGVLL 180
             +  + G +YP      W   F      +AS G  F DFAGS +VH  G   A+  VLL
Sbjct: 118 AATFCLVGFVYPFFEGIAWNHAFGIQEWLLASFGAEFHDFAGSVVVHAMGGWIALPAVLL 177

Query: 181 LGARKGKYGPNGQV-NPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKV 239
           LGAR+G+Y  +G +    P S++P   LG +IL +GWFGFN     ++S  +       V
Sbjct: 178 LGARRGRYHKDGGIAGAHPPSSIPFLALGAWILIVGWFGFN-----VMSAQSLDKISGLV 232

Query: 240 FVNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLV 299
            +N+  A   G ++AL++     GK D   + NG LAGLVA+ A       L A V G V
Sbjct: 233 ALNSLMAMVGGTLAALVL-----GKNDPGFVHNGPLAGLVAVCAGSDLMHPLGALVTGGV 287

Query: 300 AGGL-VVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANA-------TITAQL- 350
           AG L VV   +  +R KIDD +G   +HG+ G  G +   +    A       +  +QL 
Sbjct: 288 AGALFVVMFTLTQNRWKIDDVLGVWPLHGLCGAWGGIAAGIFGLEALGGAGGVSFLSQLL 347

Query: 351 -TGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEFVTV 404
            TG AI+ A V      V+ V+K  +GIR+ +E+EYNG D S   I A  E  T+
Sbjct: 348 MTGLAIVIALV--GGGLVYGVIKQLVGIRLDQEDEYNGADLSIHKITASAERETL 400