Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 525 a.a., ammonium transporter (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  246 bits (627), Expect = 1e-69
 Identities = 156/452 (34%), Positives = 235/452 (51%), Gaps = 60/452 (13%)

Query: 3   VSELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLL 62
           V   R A++  + L+ G LVM+M AGFA+ E G  R+KN    +  N+++Y I  + Y +
Sbjct: 74  VGHNRIAINMVWTLLCGFLVMFMQAGFALAETGFTRAKNAGHTMAMNMMIYGIGMLGYWI 133

Query: 63  VGYNIMY----------------------VDNAEGGWLPSFGTLIGSQAADANHALESDF 100
            G+ +                        +   E G   + G  +   A DA   + S F
Sbjct: 134 CGFALQMGGVGGVLSLGGAGALANEFTVTIAGKEFGLFGTTGFFLSGDAYDA--VIFSVF 191

Query: 101 FFQVVFVATAMSIVSGAVAERMKLWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLG---- 156
            FQ+VF+ T  +I +G++AER    +F+V+   ++  +YP+   W WG G++++LG    
Sbjct: 192 LFQMVFMDTTATIPTGSMAERWTFKSFVVYGFFISMFVYPLFANWVWGGGWLSALGRNFG 251

Query: 157 ----FVDFAGSGIVHMTGAAAAIAGVLLLGARKGKYGPNGQVNPIPGSNLPMATLGMFIL 212
                 DFAGS +VHMTG  AA AG ++LG R GK+ P+G    +PG ++PMA  G FIL
Sbjct: 252 LGHGMADFAGSAVVHMTGGVAAAAGAIVLGPRLGKFKPDGTPVAMPGHHIPMAIAGCFIL 311

Query: 213 WMGWFGFNGGSQLMVSDAANASAVAKVFVNTNTAAALGAISALIVCKMIWGKADLTMILN 272
             GWFGFN GS L   D      +  +  NT  A+A GA  +++   M +GK D++M  N
Sbjct: 312 AFGWFGFNAGSTLAGGDL----RIGVIATNTMLASASGAFFSMMYMWMRYGKPDVSMAAN 367

Query: 273 GILAGLVAITADPLSPSLLMAGVIGLVAGGLVVFSIVGLDR-IKIDDPVGAISVHGVAGF 331
           G+LAGLVAIT+     + + A  IG VAG L+  S++ +++ +KIDDPVGAISVHGV G 
Sbjct: 368 GLLAGLVAITSPCAFVNSVAAVGIGAVAGILLCVSVLFVEQTLKIDDPVGAISVHGVNGA 427

Query: 332 LGLMCVPLSNANAT----------------------ITAQLTGAAIIFAWVFSASFAVWF 369
            G++ + L  A+ T                        AQL G      +VF   +  + 
Sbjct: 428 WGVLSLGLF-ADGTYGEGLNGVEGAVKGLFYGDVSQFMAQLAGVITNIVFVFVVMYVFFK 486

Query: 370 VLKMTMGIRVSEEEEYNGMDASDCGIDAYPEF 401
           +L   + +RV  E E  G+D ++  + AYP+F
Sbjct: 487 LLDKVVPLRVDPELELEGLDQAEVAVSAYPDF 518