Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 402 a.a., ammonium transporter (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  204 bits (520), Expect = 3e-57
 Identities = 133/402 (33%), Positives = 204/402 (50%), Gaps = 28/402 (6%)

Query: 9   ALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIM 68
           A DT + L+  ALVM+M  G A+   GLVR++N       + +L  +A +++ ++GY + 
Sbjct: 3   AADTAFILVCSALVMFMTPGLALFYGGLVRARNVLSTTMHSFILLGVASIVWAVIGYTLA 62

Query: 69  Y---VDNAEGGWLPSFGTLIGSQAADANHALESDFF--FQVVFVATAMSIVSGAVAERMK 123
           +   +    GG   +F   +G + +++   +    F  FQ +F     +++SGA AER++
Sbjct: 63  FGPDIGGVIGGLDFAFLNGVGMEPSESVTNIPHLLFMVFQCMFAVITPALISGAYAERIR 122

Query: 124 LWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLLLGA 183
             A L+FSV+   ++Y    +W WG G++  LG +DFAG  +VHM+ AAAA+A   +LG 
Sbjct: 123 FRAMLLFSVLWLVVVYAPMAHWVWGGGWMFGLGALDFAGGAVVHMSSAAAALAAAHVLGR 182

Query: 184 RKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVNT 243
           R G YG      P    NLPM  LG  ILW GWFGFN GS L    AAN  A A  FV T
Sbjct: 183 RHG-YGR----EPFVPHNLPMTVLGAGILWFGWFGFNAGSAL----AANGLA-ANAFVTT 232

Query: 244 NTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVAGGL 303
           +  AA   IS +    +  GK       +G +AGLV IT      + + A ++GL+ G L
Sbjct: 233 HLCAAAAVISWVAAEWLHTGKPTTLGAASGAVAGLVVITPAAGFVAPMPAIIMGLIGGAL 292

Query: 304 VVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANATITAQ-----------LTG 352
               ++     K DD +  + VHGV G  G +   +   +A  TA            +  
Sbjct: 293 CYGGVLMKHVFKYDDALDVVGVHGVGGTFGALATGIFATSAVNTASGLLEGNPSQLWIQF 352

Query: 353 AAIIFAWVFS--ASFAVWFVLKMTMGIRVSEEEEYNGMDASD 392
            +++  W+F   AS  ++ V+   +G+R   E E  G+D S+
Sbjct: 353 VSVVATWLFCYVASRILFHVVDALVGLRADTESEIAGLDVSE 394