Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 428 a.a., ammonium transporter AmtB from Pantoea sp. MT58

 Score =  172 bits (436), Expect = 2e-47
 Identities = 124/408 (30%), Positives = 199/408 (48%), Gaps = 32/408 (7%)

Query: 11  DTFYFLISGALVMWMAA-GFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNIMY 69
           D  + +I  ALV++M+  G A+   GL+R KN   +LT+  V +++ CV++++ GY++ +
Sbjct: 31  DNAFMMICTALVLFMSIPGIALFYGGLIRGKNVLSMLTQVAVTFSLVCVLWVVYGYSLAF 90

Query: 70  VDNAE--GGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERMKLWAF 127
            +     GG+  +    I   A   +        FQ  F    + ++ GA+AER++  A 
Sbjct: 91  SEGNAFFGGFGWAMLKNIQLTAVMGSFYQYIHVAFQASFACITVGLIVGAIAERIRFSAV 150

Query: 128 LVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLLLGARKGK 187
           L+F  V   + Y    +  W  GF+A  G +DFAG  +VH+  A A + G  L+G R G 
Sbjct: 151 LIFVGVWLTLSYLPIAHMVWAGGFLAQDGALDFAGGTVVHINAAVAGLVGAYLVGKRAG- 209

Query: 188 YGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVFVNTNTAA 247
           +G           NLPM   G  IL++GWFGFN GS    + AAN  A A  F+NT  A 
Sbjct: 210 FGKEA----FKPHNLPMVFTGTAILYVGWFGFNAGS----ASAANEIA-ALAFLNTVVAT 260

Query: 248 ALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAG--VIGLVAGGLVV 305
           A   ++       + GK  L    +G +AGLVAIT  P    + + G  +IGLV G   +
Sbjct: 261 AGAVLAWTFGEWAVRGKPSLLGACSGFIAGLVAIT--PACGYVGVGGSLIIGLVGGLAGL 318

Query: 306 FSIVGLDR-IKIDDPVGAISVHGVAGFLGLMCVPLSNANA--------------TITAQL 350
           + +  L + +++DDP     VHGV G +G +   +  +++               +  QL
Sbjct: 319 WGVTTLKKWLRVDDPCDVFGVHGVCGIVGCILTGVFASSSLGGVGYAQGVTMGHQVWVQL 378

Query: 351 TGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAY 398
               +   W    +F  + +  + +G+RV EE E  G+D +  G +AY
Sbjct: 379 FSVGLTIVWSGVVAFIGFKLADLIVGLRVPEEHEREGLDVNSHGENAY 426