Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 437 a.a., ammonium transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  421 bits (1082), Expect = e-122
 Identities = 215/401 (53%), Positives = 284/401 (70%), Gaps = 8/401 (1%)

Query: 8   FALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLLVGYNI 67
           + + T  F ++G LV +MA GFAMLE GLVRSKN T  +TKN+ LY+IA VMY L+G+N+
Sbjct: 35  YIMTTLLFCMAGFLVFFMACGFAMLEGGLVRSKNVTMQMTKNIALYSIAAVMYWLIGFNL 94

Query: 68  MYVDNAEGG----WLPSFGTLIGSQAADAN---HALESDFFFQVVFVATAMSIVSGAVAE 120
           MY  +  G     ++P+    +G  AADA     ++ SDFFFQ+VFVA   SIVSGA+AE
Sbjct: 95  MYPGDFNGYVGSFFVPTVLDPVGVAAADAALDYASIGSDFFFQLVFVAATASIVSGALAE 154

Query: 121 RMKLWAFLVFSVVMTGIIYPVEGYWTWGKGFIASLGFVDFAGSGIVHMTGAAAAIAGVLL 180
           R+KLW FL F VV+TGI+YP+ G W WG G+++ +GF DFAGS +VH  G  AA+AG ++
Sbjct: 155 RIKLWPFLAFVVVLTGIMYPISGSWQWGGGWLSEMGFSDFAGSTVVHSVGGWAALAGAII 214

Query: 181 LGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANASAVAKVF 240
           LG R GKY  +G+VNP+PGSNL +ATLG FILW+GWFGFNGGSQL +    + S V+++F
Sbjct: 215 LGPRLGKY-KDGRVNPMPGSNLALATLGTFILWLGWFGFNGGSQLAMGTVGDVSDVSRIF 273

Query: 241 VNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAGVIGLVA 300
            NTN AAA GA++ALI+ ++++ K DLTM+LNG LAGLV+ITA PL P+L  A  IG V 
Sbjct: 274 ANTNMAAAAGALTALILTQVLYKKPDLTMVLNGALAGLVSITASPLDPTLFGALWIGAVG 333

Query: 301 GGLVVFSIVGLDRIKIDDPVGAISVHGVAGFLGLMCVPLSNANATITAQLTGAAIIFAWV 360
           G +VVF++  LD+ KIDD VGAI VH  AG  G + V      A++  QL G A    + 
Sbjct: 334 GVIVVFTVPLLDKFKIDDVVGAIPVHLFAGIWGTIAVVFYQEGASLVTQLVGIAAYGVFT 393

Query: 361 FSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPEF 401
           F     VW++LK+TMGIRVSEE+E NG+D S+ G++AYP+F
Sbjct: 394 FGVGLIVWYLLKLTMGIRVSEEDEINGLDTSELGMEAYPDF 434