Pairwise Alignments

Query, 408 a.a., ammonium transporter (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 395 a.a., ammonium transporter from Burkholderia phytofirmans PsJN

 Score =  189 bits (481), Expect = 9e-53
 Identities = 142/414 (34%), Positives = 202/414 (48%), Gaps = 35/414 (8%)

Query: 3   VSELRFALDTFYFLISGALVMWMAAGFAMLEAGLVRSKNTTEILTKNVVLYAIACVMYLL 62
           +  L+   DT + L+  A+V+ M AGFA LE G VR KN    L K +V ++++ + Y  
Sbjct: 1   MESLKTGTDTLFLLLGAAMVLAMHAGFAFLELGTVRKKNQVNALVKILVDFSVSTIAYFF 60

Query: 63  VGYNIMYVDNAEGGWLPSFGTLIGSQAADANHALESDFFFQVVFVATAMSIVSGAVAERM 122
           +GY I Y        +  FG+   S AA   +AL   FFF + F A   +IVSG +AER 
Sbjct: 61  IGYTIAY-------GVQFFGSA-ESLAAHNGYALVR-FFFLLTFAAAIPAIVSGGIAERS 111

Query: 123 KLWAFLVFSVVMTGIIYPVEGYWTWGKGF--------IASLGFVDFAGSGIVHMTGAAAA 174
           K    L  + V+ G IYP      W   F        +  + F DFAGS +VH  G   A
Sbjct: 112 KFNPQLFATFVLVGFIYPFFEGIAWSNRFGIQDGLAHVFGVPFHDFAGSVVVHAFGGWVA 171

Query: 175 IAGVLLLGARKGKYGPNGQVNPIPGSNLPMATLGMFILWMGWFGFNGGSQLMVSDAANAS 234
           +  VLLLGAR G+Y  +G +   P SN+P   LG ++L +GWFGFN  S   +   +   
Sbjct: 172 LPAVLLLGARHGRYHRDGGIAAHPPSNIPFLALGAWVLAVGWFGFNVMSAQTIDKISGL- 230

Query: 235 AVAKVFVNTNTAAALGAISALIVCKMIWGKADLTMILNGILAGLVAITADPLSPSLLMAG 294
               V VN+  A   G ++A +      G+ D     NG LAGLVA+ A       L A 
Sbjct: 231 ----VAVNSLMAMVGGTLTAWLA-----GRNDPGFTYNGPLAGLVAVCAGSDVMHPLGAL 281

Query: 295 VIGLVAGGLVVFSIVGL-DRIKIDDPVGAISVHGVAGFLGLMCVPLSNANA-------TI 346
           V G +AG L V+    + +R +IDD +G   +HG+ G  G +   +    A       + 
Sbjct: 282 VTGGIAGVLFVYMFTCVQNRWRIDDVLGVWPLHGLCGAWGGIAAGIFGLRALGGLGGVSF 341

Query: 347 TAQLTGAAIIFAWVFSASFAVWFVLKMTMGIRVSEEEEYNGMDASDCGIDAYPE 400
            AQL G     A        V+  +++T+G+R+ +E+EYNG D S   I A  E
Sbjct: 342 GAQLVGTLGGIAVATLGGTLVYGAIRLTVGLRLDQEDEYNGADLSIHKISATSE 395