Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 617 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  560 bits (1444), Expect = e-164
 Identities = 291/588 (49%), Positives = 404/588 (68%), Gaps = 7/588 (1%)

Query: 15  NWHVIKLLWPYLLEYKG-----RVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQT 69
           +W VI  L P+L          R+ L+M  L++AKLA V +P   K  VD L   + A  
Sbjct: 19  DWRVIARLLPHLWPADAPALRLRLVLSMGVLLLAKLAGVVVPLFYKHAVDALSVPERA-A 77

Query: 70  LSVPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERR 129
           + +P+G++ AYG  RL  +   EIRD LF RV ERAI  L L  F HLH L L FHL+R+
Sbjct: 78  IVLPLGVIAAYGLARLGNLAFTEIRDLLFARVIERAIHVLSLRTFRHLHGLSLRFHLDRQ 137

Query: 130 TGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYI 189
           TGGLSR IERGT  +  ++R  V    P+L+E+ MV G+ +  Y   +A +   ++  Y+
Sbjct: 138 TGGLSRVIERGTRAIEVVLRQFVLRAGPSLIELVMVCGVLWTLYDWTYAVVMVGALAVYV 197

Query: 190 WFSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEV 249
            +++  TEWR ++ R     D+ ++++AIDSL+NYETVKYF NE++E++R+D+AL  +E 
Sbjct: 198 AWTLAITEWRLDFRRSMNTHDAEASSKAIDSLINYETVKYFGNEEHEAKRFDRALSAYEE 257

Query: 250 AKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLN 309
              K+  SL  LN GQ+ II++++ A+M +AA  +    MT GDFVL+N +++QL++PLN
Sbjct: 258 VAVKSHRSLSLLNVGQSAIISLSLVAVMIMAAVDIRGGRMTPGDFVLVNTYLLQLYVPLN 317

Query: 310 FLGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYD-DRPI 368
           FLG VYRE++  L ++E +F L+D+ P + D  +A D   + G + FE V F+Y+ +R +
Sbjct: 318 FLGMVYREVKQGLVDMEVLFGLIDRPPEVADPANAADLVVRGGAVRFEGVRFAYNPEREV 377

Query: 369 LRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRA 428
           L+ VS ++ AG  +AVVG SGAGKSTL +LLFRFYDV  GR+LIDGQD+R +TQ +LRRA
Sbjct: 378 LKGVSLEIPAGGTLAVVGHSGAGKSTLSRLLFRFYDVTGGRVLIDGQDLRDVTQASLRRA 437

Query: 429 IAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGL 488
           I IVPQDTVLFND++  NI YGRP AS  +V  A +LA + DF+ SL  G+DT+VGERGL
Sbjct: 438 IGIVPQDTVLFNDTIGYNIAYGRPGASRQEVERAARLAAIHDFVQSLKNGYDTQVGERGL 497

Query: 489 KLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRL 548
           KLSGGEKQRVAIAR ILK   +L+ DEATS+LDS +E+ I  ALR+V++G T+LV+AHRL
Sbjct: 498 KLSGGEKQRVAIARTILKDPAILILDEATSALDSHTEREIQGALRDVSRGRTTLVIAHRL 557

Query: 549 STIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQQHLSV 596
           ST++DAD+I+VL  G + E G+H  LL  +GLYA LWR Q +   L+V
Sbjct: 558 STVIDADRILVLDGGRVAESGSHDDLLRAEGLYAALWRKQQQSSSLAV 605