Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 618 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  298 bits (764), Expect = 3e-85
 Identities = 196/581 (33%), Positives = 317/581 (54%), Gaps = 20/581 (3%)

Query: 17  HVIKLLWPYLLEYKGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQTLS-VPI- 74
           H+IK    Y   YKG++ L+M  + V  L++ G  +++K  +D +  NK  Q L  VP+ 
Sbjct: 17  HLIKRCLKYFRPYKGQIFLSMLAMGVVSLSTAGSAWLVKPALDEIFINKDEQALLYVPLL 76

Query: 75  --GLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRTGG 132
              L L  GA R        +++        R + +L   ++D +  L L F+ E + G 
Sbjct: 77  FFVLTLVKGAGRY-------VQNYFMQYSGLRVLEKLRSELYDKIIYLPLQFYEESQVGM 129

Query: 133 LSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAY--IW 190
           L   I    + +   +  +V  +   L  + +V  +F+ N  +A  ++  +    Y  +W
Sbjct: 130 LMSRIINDVTMIRNSLPSIVMMVRQLLTMLGLVGVVFYQNPRLAVWAVLVLPAALYPLVW 189

Query: 191 FSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVA 250
           F     + R    R+ +K   +S     +       VK F  E++E+ R+D   ++    
Sbjct: 190 FG---RKLRKYGRRNQSKLADISVVLQ-EVFSGIRVVKAFATERHEARRFDDENERLARL 245

Query: 251 KRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNF 310
             K        +    LI A+ +  ++    ++V   E T G F    A +  ++ P+  
Sbjct: 246 YLKQASVSELSSPIMELIGAVGIGLVIWFGGHEVIAGETTAGTFFSFVAALAMMYDPVKS 305

Query: 311 LGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYDDR--PI 368
           L     E++ ALA  ER+F +LD     V++     F+    EL F+ V+F+Y  +  P 
Sbjct: 306 LNSYNMEVQRALAGAERVFEILDAPELTVEQGGDTPFDEPFRELRFDGVTFTYGSKTAPA 365

Query: 369 LRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRA 428
           L NVS  V AG++VA+VG SGAGKST + L+ RFY+ +QG I+++G+ +   T + LRR 
Sbjct: 366 LDNVSLTVRAGERVAIVGPSGAGKSTFVNLIPRFYEPQQGAIILNGRPVSDYTLETLRRN 425

Query: 429 IAIVPQDTVLFNDSLVENIRYGRPNASDDD-VRHAIKLAHLEDFIASLSQGWDTKVGERG 487
           +++V QDT LFN  + +NI YG   A D+D VR A   A+ ++FI  L +G+DT +GERG
Sbjct: 426 VSMVSQDTFLFNLPVRDNITYGLSGAIDEDTVRAAAMSAYADEFIRELPEGYDTLLGERG 485

Query: 488 LKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHR 547
           +KLSGG+KQR+ IARAI+K +P+L+ DEATS+LDS +E+ +  AL  + +  TS+V+AHR
Sbjct: 486 VKLSGGQKQRLTIARAIMKDAPLLILDEATSALDSEAERIVQKALDNLMENRTSIVIAHR 545

Query: 548 LSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQ 588
           LSTI+ AD+I+V+ +G IV+ G H  LLA+  +YA+L+ +Q
Sbjct: 546 LSTILSADRILVMEQGRIVDAGRHEELLARCPMYARLYAMQ 586