Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 618 a.a., multidrug ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  282 bits (722), Expect = 3e-80
 Identities = 167/444 (37%), Positives = 257/444 (57%), Gaps = 15/444 (3%)

Query: 161 EIAMVIGIFFFNY-GVAFASITFISVLAYIWFSVIATEWR------TEYVRDAAKADSLS 213
           +I + I I+F    GV  +   ++    +IW +  A   R      +   R+ A A SL 
Sbjct: 160 DILVFITIYFATLIGVVGSFDIWMLAPFFIWLAAFAVALRYFVPRLSAVARNQADARSLM 219

Query: 214 NTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVAKRKNRLSLFALNGGQALIIAIAM 273
             R  D+  N  TVK F++   E++    A+ ++ V   +    +        L+  + +
Sbjct: 220 TGRITDAYTNIATVKLFSHAGREADYARSAMREFLVTVNQQMRLVSGFEVVNHLLNMVLI 279

Query: 274 TAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNFLGFVYREIRGALANIERMFSLLD 333
                ++ Y  T  ++ +G      A  ++L    +++ +    +   +  ++   + L 
Sbjct: 280 IGATGVSLYLWTQGKVGVGAVAASTAMALRLNGIAHWVMWEMSSLFEHVGTVQDGINTLA 339

Query: 334 KHPSIVDKPDALDFEPKRGELSFENVSFSYDD---RPILRNVSFKVAAGKKVAVVGDSGA 390
           +   + D PDA   +  +GEL FE VSFSY     RP++  +   +  G+K+ +VG SGA
Sbjct: 340 RAHDVKDAPDAQPLKVSQGELRFEGVSFSYGGAAPRPVVDKLDLVIRPGEKIGLVGRSGA 399

Query: 391 GKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFNDSLVENIRYG 450
           GKST++ LL RFYD+E GRI IDGQDI  +TQD+LR  I +V QDT L + S+ ENI YG
Sbjct: 400 GKSTIVNLLLRFYDIEGGRITIDGQDIAHVTQDSLRAQIGMVTQDTSLLHRSVRENITYG 459

Query: 451 RPNASDDDVRHAIKLAHLEDFIASLSQ-----GWDTKVGERGLKLSGGEKQRVAIARAIL 505
           RP+ASD ++ HA + A   DFI +L+      G+D  VGERG+KLSGG++QR+AIAR +L
Sbjct: 460 RPDASDAEMTHAAERAEAHDFIGTLADAKGRTGYDAHVGERGVKLSGGQRQRIAIARVML 519

Query: 506 KGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVDADQIVVLSKGEI 565
           K +P+L+ DEATS+LDS  E AI ++L ++ +G T + +AHRLSTI   D+++VL +G I
Sbjct: 520 KDAPILLLDEATSALDSEVEAAIQTSLYKLMEGKTVVAIAHRLSTIAAMDRLIVLDQGRI 579

Query: 566 VEQGNHSSLLAQDGLYAKLWRIQN 589
           VEQG+H+ LLA +GLYA+LW  Q+
Sbjct: 580 VEQGSHAELLAANGLYARLWSHQS 603