Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 611 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  543 bits (1399), Expect = e-159
 Identities = 282/582 (48%), Positives = 393/582 (67%), Gaps = 8/582 (1%)

Query: 18  VIKLLWPYLLE-----YKGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQTLSV 72
           VI+ + PYL        K RV LAM+ L +AKL +VG PF+ K  VD+L    +   L  
Sbjct: 23  VIRKVAPYLWPDDKPWVKRRVVLAMAALFLAKLIAVGTPFLYKTAVDSLAGEVSDGVLLA 82

Query: 73  --PIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDLDFHLERRT 130
              +GL +AYG  RL+TV   ++RD +F +V +RA+R L L  F H+HRL + +H+ R+T
Sbjct: 83  IGAVGLTIAYGMARLMTVGFQQLRDVIFAKVAQRALRTLALETFTHIHRLSMRYHITRKT 142

Query: 131 GGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYIW 190
           GGLSR IERG  GV FL+RF++F+I P +LE+A++  I    +   + +    ++  Y+ 
Sbjct: 143 GGLSRIIERGVKGVEFLLRFLLFSIGPLILELALISIILTLYFDAWYLAAVAGTIALYVG 202

Query: 191 FSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQALDQWEVA 250
           F+   TEWR    R+  + D+ +N +AIDSLLN+ETVKYF  E  E+ERYD A++ +E A
Sbjct: 203 FTFKVTEWRVRIRREMNRQDTDANQKAIDSLLNFETVKYFGAETREAERYDAAMEGYEAA 262

Query: 251 KRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMMQLFMPLNF 310
             K   +L  LN GQ+++I   +  +M +AA  V   ++T+GDFV++NA+M+Q+  PLNF
Sbjct: 263 ALKTSYTLGFLNFGQSVLITGGLVVVMVMAAMGVQRGDLTVGDFVMVNAYMLQITQPLNF 322

Query: 311 LGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYDD-RPIL 369
           LG VYREIR AL ++  MF LL++   + DKP A D     GE+  ++V F YD  RPIL
Sbjct: 323 LGTVYREIRQALIDMGEMFELLEQPAEVQDKPGAHDLRVTGGEIVLDDVVFGYDPARPIL 382

Query: 370 RNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAI 429
           + VS +V AG+ +A+VG SG+GKST+ +LLFRFYDV +G + IDGQD+R +TQD+L   I
Sbjct: 383 KGVSLRVGAGQTLALVGPSGSGKSTIGRLLFRFYDVSEGALRIDGQDVRDVTQDSLHAQI 442

Query: 430 AIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLK 489
            +VPQDTVLFND+++ NI YGRP AS  ++  A K A + +FI SL +G++TKVGERGLK
Sbjct: 443 GVVPQDTVLFNDTILYNIAYGRPEASRSEIEAAAKAAEIHEFIYSLPEGYETKVGERGLK 502

Query: 490 LSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLS 549
           LSGGEKQRV IAR +LK  P+L+ DEATS+LDS +E+ I  +L  + +G T + +AHRLS
Sbjct: 503 LSGGEKQRVGIARTLLKNPPILLLDEATSALDSETERDIQDSLAAMGQGRTVITIAHRLS 562

Query: 550 TIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQ 591
           T+VDAD+IVVL  G IVE+G H  LLA+ G YA +W  Q  +
Sbjct: 563 TVVDADRIVVLENGVIVEEGTHDELLARGGRYASMWTRQQSE 604