Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 629 a.a., ATP-binding cassette, subfamily B from Paraburkholderia bryophila 376MFSha3.1

 Score =  579 bits (1492), Expect = e-169
 Identities = 302/593 (50%), Positives = 418/593 (70%), Gaps = 16/593 (2%)

Query: 15  NWHVIKLLWPYLLEYKGRVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQTLS--- 71
           +W  I  L PYL  YK RV  A+SCLI AK+A++G+P ++K +VD+L + +    L    
Sbjct: 19  DWQTILSLLPYLATYKWRVIFALSCLIGAKIANLGVPIVMKRIVDSLASVQHLTALGRAH 78

Query: 72  -----VPIG----LVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRLDL 122
                V +G    LV+AY  VRL T +  E+R+ LF +VTE A+R+L L VF HLH L L
Sbjct: 79  DSPGIVLLGGVGLLVVAYAVVRLSTSLFTELREILFSKVTESAVRQLALKVFRHLHGLSL 138

Query: 123 DFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITF 182
            FHL+R+TGG+SRDIERGT G++ L+ + +++I+PTL+E+ +V+G F   Y   +A +TF
Sbjct: 139 RFHLDRQTGGMSRDIERGTRGITQLISYSLYSILPTLVEVGLVLGFFVVKYEAYYAVVTF 198

Query: 183 ISVLAYIWFSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERYDQ 242
           +++  YI F+V  TEWRT + R   + DS +N+RAIDSLLNYETVKYF NE++E+ RYD+
Sbjct: 199 VALAVYIVFTVKVTEWRTHFRRTMNELDSKANSRAIDSLLNYETVKYFGNEEWEASRYDE 258

Query: 243 ALDQWEVAKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAFMM 302
            L ++  A  K++ SL ALN GQ  II   +  ++  A   V    +TLGD VLIN FM+
Sbjct: 259 NLKRYRTAAIKSQRSLSALNFGQQAIIGTGLVFILWRATEGVMAGRLTLGDLVLINTFML 318

Query: 303 QLFMPLNFLGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFS 362
           QL++PLNFLG VYRE++ +L +++RMF+LL     + D PDA   +    ++ F+ V+FS
Sbjct: 319 QLYIPLNFLGVVYRELKQSLTDMDRMFTLLGAAQEVPDLPDAPALQVSGAQVRFDRVNFS 378

Query: 363 YDD-RPILRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQ---GRILIDGQDIR 418
           Y+  R IL +VSF + AG   AVVG SG+GKSTL +L+FRFYD+++   G I IDGQDIR
Sbjct: 379 YEPARQILHDVSFTIPAGTTTAVVGHSGSGKSTLARLMFRFYDLDRATGGAITIDGQDIR 438

Query: 419 QLTQDALRRAIAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQG 478
            + Q +LR +I IVPQDTVLFNDS+  NI YGRP+A+ D+V  A + AH+ +FI  L +G
Sbjct: 439 DVAQASLRASIGIVPQDTVLFNDSIYYNIAYGRPSATRDEVIAAARAAHIHEFIEGLPKG 498

Query: 479 WDTKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKG 538
           +DT VGERGLKLSGGEKQRVAIAR ILK  P+L+FDEATS+LDS SE+AI   L ++A+ 
Sbjct: 499 YDTPVGERGLKLSGGEKQRVAIARTILKNPPILLFDEATSALDSGSERAIQHELDQIARE 558

Query: 539 HTSLVVAHRLSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQ 591
            T+L++AHRLST+V A QI+V+ KG IVE+G H+ LL  +GL+A++W +Q ++
Sbjct: 559 RTTLIIAHRLSTVVHAQQIIVMDKGRIVERGTHAELLRANGLFAQMWALQQQR 611