Pairwise Alignments

Query, 596 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., multidrug ABC transporter ATPase from Burkholderia phytofirmans PsJN

 Score =  291 bits (744), Expect = 7e-83
 Identities = 189/569 (33%), Positives = 308/569 (54%), Gaps = 19/569 (3%)

Query: 32  RVALAMSCLIVAKLASVGLPFILKDVVDTLDANKTAQTLSVPIGLVLAYGAVRLLTVITG 91
           R+ +  + ++++ +A V  P     +VD + +   +  ++     V A+  +  L +   
Sbjct: 30  RIVVITALVLLSAVADVLTPMFAGRLVDAIASGAASDAVAWHAA-VTAFCVLSALGLGAT 88

Query: 92  EIRDTLFG---RVTERAIRRLGLAVFDHLHRLDLDFHLERRTGGLSRDIERGTSGVSFLM 148
            +R  ++    R+T + +  +    F  + R   D+H     G   R I RG   +  L 
Sbjct: 89  LLRQGVYFNIIRLTLKMMSEIAANAFHRVQRFSTDWHANSFAGSTVRKITRGMWALDLLN 148

Query: 149 RFMVFNIVPTLLEIAMVIGIFFFNYGVAFASITFISVLAYIWFSVIATEWRTEYVRDAAK 208
             ++  ++P+L+ +     +  + + +  A +   SVL    +  +       +V  AA+
Sbjct: 149 DTLLIALLPSLVMLVGATVLLGWRWPMMGAVVGIGSVL----YIAVTVAMSLGFVAPAAR 204

Query: 209 ADSLSNTRA----IDSLLNYETVKYFNNEKYESERYDQALDQWEVAKRKNRLSLFALNGG 264
             +  +TR      D++     VK F  E+ E     + + +W    R+  +      G 
Sbjct: 205 LANAWDTRMGGALADAVSCNGVVKAFGAEEREEALLARVIGKWRHRTRRTWMRGTINGGV 264

Query: 265 QALIIAIAMTAMMALAAYKVTHNEMTLGD--FVLINAFMMQLFMPLNFLGFVYREIRGAL 322
           Q  ++     A++  A       + ++GD  F L   FM+Q +  L  +G   R ++ ++
Sbjct: 265 QGGMLVAIQAAILGAALLLWARGDASVGDITFALTMFFMLQGY--LRDVGMHIRNLQRSV 322

Query: 323 ANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVSFSYDDR--PILRNVSFKVAAGK 380
            ++E + S   +   I D+P A+     +GE+ FE+V+F Y     P+  N S ++A G+
Sbjct: 323 NDMEELVSQESQPLGIEDRPGAVPITIGKGEIRFEHVTFHYGTNGLPLYDNFSVRIAPGE 382

Query: 381 KVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFN 440
           +V +VG SG+GK+T IKL+ R YD+ +GRI IDGQDI Q+ Q +LR  IAIV Q+ VLF+
Sbjct: 383 RVGLVGHSGSGKTTFIKLIQRLYDISEGRITIDGQDIAQVRQASLRSQIAIVQQEPVLFH 442

Query: 441 DSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWDTKVGERGLKLSGGEKQRVAI 500
            SL ENI Y RP AS  ++  A KLA    FIA+L  G+DT VGERG+KLSGGE+QRVAI
Sbjct: 443 RSLAENIAYARPGASRAEIERAAKLASAHGFIAALPNGYDTLVGERGVKLSGGERQRVAI 502

Query: 501 ARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVDADQIVVL 560
           ARA L  +P+L+ DEATSSLDS SE  I  A+  +  G T+LVVAHRLST+   D+++VL
Sbjct: 503 ARAFLADAPILILDEATSSLDSESEVLIQQAMERLMTGRTTLVVAHRLSTVRALDRLLVL 562

Query: 561 SKGEIVEQGNHSSLL-AQDGLYAKLWRIQ 588
            KG+++E+G+H +L+  ++GLY +L+  Q
Sbjct: 563 DKGKVIEEGSHDALIRLENGLYRRLFERQ 591