Pairwise Alignments

Query, 496 a.a., glutamate synthase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 516 a.a., ferredoxin-dependent glutamate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (471), Expect = 2e-51
 Identities = 125/353 (35%), Positives = 176/353 (49%), Gaps = 21/353 (5%)

Query: 112 IMFMNSAFPPQDEDITPIQPLTIGPHCRVPYTTSAICHISAMSFGALSRPAVTALSHGAA 171
           IM    A  P  E+      L IGP  R P        +S MSFGALS  A  AL+ GA 
Sbjct: 151 IMTAQMANKPLFEEEAVDTELIIGPEARKPLRLKIPLLVSDMSFGALSEEAKVALAKGAE 210

Query: 172 QAGCWLNTGEGGLSPYHLKGGCDLVFQIGTAKYGVRNEHGHLDDDKLTAIAAHPEVKMFE 231
            AG  + +GEGG+ P          +++ +A++G +              A   +++ F 
Sbjct: 211 LAGTGICSGEGGMLPEEQAANSRYFYELASAQFGYQE-------------ALMAKIQAFH 257

Query: 232 IKMSQGAKPGKGGILPGVKVTEEIAHIRGIPLGQDSISPNGHIEFNNVGDILDMIARVRE 291
            K  QGAK G GG LPG K   +IA IRGIP GQD+ISP    E N+V D      RVRE
Sbjct: 258 FKGGQGAKTGTGGHLPGSKNQGKIAQIRGIPAGQDAISPPRFRELNSVADFKRFADRVRE 317

Query: 292 VTGK-PTGIKAVLGDVQWLEDFCNEIERRGEASAPDFFTLDSADGGTGAAPQPLMDYVGL 350
           ++G  P G K     ++       +I+   +ASA D+  LD   GGTGAAPQ   D++ +
Sbjct: 318 LSGGVPIGFKLSANHIE------RDIQFALDASA-DYIILDGRGGGTGAAPQIFRDHISV 370

Query: 351 PLKESLPILVNILIKHGLGKRIKVIASGKLIVPSRVAWALALGADFIASARGNMFALGCI 410
           P   +L      L + G   R+ +I +G L +P     A+ALGAD +A A   M A+GC+
Sbjct: 371 PTIPALARARRYLDQQGASGRVTLIITGGLRLPMDFVKAMALGADGVALANSAMQAIGCV 430

Query: 411 QALQCNKDTCPTGITTHNKKLQHGLDPRDKSTRVANYNHNLHHDLALIAHSCG 463
            A  CN + CP GI T N  L+  L+    + ++AN+       + ++A +CG
Sbjct: 431 AARICNTNNCPAGIATQNADLRQRLNIDKSAQQLANFLGASTELMQVMARACG 483