Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 678 a.a., iron ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  117 bits (293), Expect = 1e-30
 Identities = 120/489 (24%), Positives = 209/489 (42%), Gaps = 47/489 (9%)

Query: 65  SLLLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALF 124
           SL +    A+++A  +  G+  L +A +LP+ +P  + A  + ++   + P+ ++L    
Sbjct: 188 SLFVGALFAFVVALTDIRGKLALSFAFMLPMMIPPQVTALAWVEMSGPSSPLLKTLGLAP 247

Query: 125 GWSSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQS 184
              SPQ  +     +L G A +L +   P ++L  +        +   A+R+ G SPW+ 
Sbjct: 248 PLGSPQPLY-----SLAGIALLLGVQHAPLVFLAVKAGLAAAPRDGVEAARLSGASPWRV 302

Query: 185 FWRLSLPMARPALAVGVALVAMETAADFATVNYFAVP----TLTTAVYDTWLGYGNLTAA 240
           F  + LP++ P L  G A+  +    +F       +P    TL T ++  +  +G+ T  
Sbjct: 303 FRDIVLPLSSPGLIAGAAIAFVSGIGNFGIPAILGIPASIETLPTLIFSRFASFGSSTFG 362

Query: 241 --AKLSAIILLVVFS--LIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGM 296
             A LS +I L+  +  L+       R  +L        A  L RL      L      +
Sbjct: 363 EIAVLSTLIALISAAGLLLQQRALKGRDYRLIGLAGARAAFTLGRLRIAAEALLWSILAL 422

Query: 297 LL---LLAFVLPS-----GILLSYAINYFEQSWDPLFWQLSV-----NSLTLALITSLVC 343
           LL   LLA V  S     G+ LS+         + LF Q        NSL LA   ++  
Sbjct: 423 LLVAPLLALVASSLVPAYGVPLSFDTMSLNAYGEVLFRQSMTLTALKNSLFLASAAAVGL 482

Query: 344 CVIALVLMFIRRVSPRSSDALPSRLASTGYALPGTVLAIGVLV----PLTLLDFAINDIA 399
             + +   ++         +L + L    YALPG VLA+  ++    PL L+        
Sbjct: 483 LAVTIPAGYLLVTRRGRLASLLAILIEIPYALPGIVLAVAFILAFAAPLPLI-------- 534

Query: 400 DWLGMAGPGLLLTGSTVALVFAFCVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRL 459
                   G+ L G+   ++ A+   F+A+++  V S++ ++ PSL+  +   G    R 
Sbjct: 535 --------GVSLYGTIWIILAAYFPSFLAVSLKPVMSAFLQMDPSLEEAARLAGAGFLRR 586

Query: 460 LQRVHLPLLTKGLFAGALLVFIESMKELPAALLLRPIGFENLATYVFQFVSDEKLE-HGA 518
           ++ V LPLL     A  +LVF+ +  EL  + LL   G + L   +F        +   A
Sbjct: 587 MRDVLLPLLAPAAGASVILVFLIAANELTVSALLWSAGTQTLGVAIFNLDDSGSSDLASA 646

Query: 519 LPAIVIVLV 527
           L  +V+V+V
Sbjct: 647 LSVLVVVMV 655