Pairwise Alignments
Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 741 a.a., iron ABC transporter permease from Pantoea sp. MT58
Score = 110 bits (276), Expect = 1e-28
Identities = 121/524 (23%), Positives = 217/524 (41%), Gaps = 63/524 (12%)
Query: 54 SLWLILWVSIGSLLLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYA 113
+L L L + GS LL L A R ++ L+ +LP+ P +++ L +
Sbjct: 223 TLGLALMTASGSTLLGLAFALAATRTSLPCKKALRMLTILPIITPPFVIGLALILLFGRS 282
Query: 114 GPVQRSLRALFGWSSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHA 173
G V SL LFG P + + L G L P +L+ S +L A
Sbjct: 283 GVVTESLATLFG-IEPGRWLYG----LTGIWIAQVLSFTPIAFLVLIGVVEGVSPSLEEA 337
Query: 174 SRIMGCSPWQSFWRLSLPMARPALAVGVALVAMETAADFATVNYFAVP--TLTTAVYDTW 231
S+ + S W++F R+SLP+ P LA + +E+ ADF L+T ++ +
Sbjct: 338 SQTLRASRWRTFSRISLPLMAPGLANAFLISFIESMADFGNPMVLGGSHGVLSTEIFFSV 397
Query: 232 LGYGNLTAAAKLSAIILLVVFSLIGVERFARRKQQLFQKQ----------------SRIQ 275
+G N + A + A+ILL F+L F ++ L K R
Sbjct: 398 VGAQNDPSRAAVLAMILLG-FTLTA---FLVQRVWLAGKSFATVTGKGDGGRHVMLPRPV 453
Query: 276 AIDLYRLSPMQTLLGLGYCGMLLLLAFVLPSGI-----------LLSYAINYFEQSWDPL 324
+Y + L L GM+++ FV G+ S ++N + W +
Sbjct: 454 RYSVYGMVIPWGLFTLVIYGMIMIGGFVQSWGLNNNLTLDHYIRAFSVSVNQGQLVWRGV 513
Query: 325 FWQLSVNSLTLALITSLVCCVIALVLMFIRRVSPRSSDALPSRLASTGYALPGTVLAIGV 384
W +L +ALI + + ++ L+ ++ + + +A+PGTV+ +
Sbjct: 514 AWNSFWTTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEFMLMLSFAIPGTVIGVSY 573
Query: 385 LVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVFAFCVRFVAIAIGSVESSYKRISPS 444
++ L P L +TG+ + L+ F R + + + ++ ++ S
Sbjct: 574 VMAYNL----------------PPLEMTGTAMILIACFVFRNMPVGVRGGIAAMSQLDKS 617
Query: 445 LDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVFIESMKELPAALLLRPIGFENLATY 504
LD SLTLG + R L++V LPLL + A + F+ ++ + A + L + +Y
Sbjct: 618 LDEASLTLGANSFRTLRKVVLPLLKPAISAALVYAFVRAITSISAVIFLVSAQYNMATSY 677
Query: 505 VFQFVSDEKLEHG-------ALPAIVIVLVGLVPLIYLNRSLEQ 541
+ V E E+G L ++++++GL L+ R L +
Sbjct: 678 IVGLV--ENGEYGVAIAYSSVLIVVMLLIIGLFQLLVGERRLRR 719
Score = 55.1 bits (131), Expect = 9e-12
Identities = 77/307 (25%), Positives = 121/307 (39%), Gaps = 30/307 (9%)
Query: 245 AIILLVVFSLIGVERFARR---KQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLA 301
A++LL VF LI A R K F S + + L + +L L + +
Sbjct: 131 ALLLLTVFLLIFAFALAERGVLKGDAFVVASIVLLVALVTTFVLYPVLSLFVASVQDIDG 190
Query: 302 FVLPSGILLSYAINYFEQSWDPLFWQLSV----------NSLTLALITSLVCCVIALVL- 350
P G++ + DP W LS +L LAL+T+ ++ L
Sbjct: 191 SFKPDGLIANMQ--------DPAIWSLSCFTGGTCGTAWRTLGLALMTASGSTLLGLAFA 242
Query: 351 MFIRRVSPRSSDALPSRLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLL 410
+ R S AL L P V+ + +++ +A G+ L
Sbjct: 243 LAATRTSLPCKKAL-RMLTILPIITPPFVIGLALILLFGRSGVVTESLATLFGIEPGRWL 301
Query: 411 --LTGSTVALVFAFCVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLL 468
LTG +A V +F + IG VE +SPSL+ S TL S R R+ LPL+
Sbjct: 302 YGLTGIWIAQVLSFTPIAFLVLIGVVEG----VSPSLEEASQTLRASRWRTFSRISLPLM 357
Query: 469 TKGLFAGALLVFIESMKELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVG 528
GL L+ FIESM + ++L L+T +F V + + + ++L+G
Sbjct: 358 APGLANAFLISFIESMADFGNPMVLGG-SHGVLSTEIFFSVVGAQNDPSRAAVLAMILLG 416
Query: 529 LVPLIYL 535
+L
Sbjct: 417 FTLTAFL 423
Score = 50.8 bits (120), Expect = 2e-10
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 51/235 (21%)
Query: 56 WLILWVSIGSLLLALPC--------AWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYT 107
W W ++ L+A P AWL+ R +F GR+ ++ L+L A+P ++ Y
Sbjct: 515 WNSFWTTLEIALIAAPLTAIVGLLTAWLIVRQKFAGRQTFEFMLMLSFAIPGTVIGVSYV 574
Query: 108 DLLDYAGPVQRSLRALFGWSSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLAR---TAFM 164
Y P + G A +++ +F + + R A
Sbjct: 575 ----------------------MAYNLPPLEMTGTAMILIACFVFRNMPVGVRGGIAAMS 612
Query: 165 EQSLNLAHASRIMGCSPWQSFWRLSLPMARPALAVGVALVAMETAADFATVNYFAVPTLT 224
+ +L AS +G + +++ ++ LP+ +PA++ + + A + AV L
Sbjct: 613 QLDKSLDEASLTLGANSFRTLRKVVLPLLKPAISAALVYAFVR-----AITSISAVIFLV 667
Query: 225 TAVYDTWLGY-------GNLTAAAKLSAIILLVVFSLIGV------ERFARRKQQ 266
+A Y+ Y G A S+++++V+ +IG+ ER RR Q
Sbjct: 668 SAQYNMATSYIVGLVENGEYGVAIAYSSVLIVVMLLIIGLFQLLVGERRLRRTTQ 722