Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 547 a.a., iron ABC transporter permease from Herbaspirillum seropedicae SmR1

 Score =  340 bits (871), Expect = 1e-97
 Identities = 218/544 (40%), Positives = 306/544 (56%), Gaps = 36/544 (6%)

Query: 16  IAVLLVLPLLALLLQAAQPDEAVFGHL---LSTVLPTYIANSLWLILWVSIGSLLLALPC 72
           +AVL+ LP+L +L      D      L     TVLP Y+A S WL L V++G +++    
Sbjct: 7   LAVLIALPILGILCAWFGLDAEGLDALRQQAETVLPGYLATSGWLALMVTLGVVVVGGAT 66

Query: 73  AWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWSSPQDY 132
           A  ++  EF GRR+  WALLLP+AMPAY+ AY YTD L YAG VQ +LR   GW      
Sbjct: 67  AVTVSLFEFRGRRWFSWALLLPMAMPAYVSAYAYTDFLQYAGVVQSTLR---GWFPG--- 120

Query: 133 FFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFWRLSLPM 192
           F  ++R L GA C+  L L+PY YLLAR A  E+  +L  A+R++G    +   R++LP+
Sbjct: 121 FRMEVRGLPGAICMFVLTLYPYAYLLARNALSERGTHLMEAARMLGAPLSERIVRVALPL 180

Query: 193 ARPALAVGVALVAMETAADFATVNYFAVPTLTTAVYDTWLGYGNLTAAAKLSAIILLVVF 252
           ARPALA G AL  MET AD+    YF + T TT +Y  W+   +  AAA+ ++++LL V 
Sbjct: 181 ARPALAAGAALALMETLADYGVSAYFGLTTFTTGIYKAWVVLDDRLAAAQYASLLLLFVT 240

Query: 253 SLIGVERFARRKQQLFQKQSRI----QAIDLYRLSPMQTLLGLGYCGMLLLLAFVLPSGI 308
            L+ +ER  + + +    +           L  LS  QT L    CG+ ++L FVLP  I
Sbjct: 241 VLLWLERREQGRMRFAATRGGRGHDGAEARLPVLSRAQTALAWLVCGLPVVLGFVLPVAI 300

Query: 309 LL-------SYAINYFEQSWDPLFWQLSVNSLTLALITSLVCCVIALVLMFIRRVS--PR 359
           LL          + +    +    W    NS     + +L   V+AL L F  R    PR
Sbjct: 301 LLRLWWSEAGQGMGFDVGRYAGWVW----NSFRFGGMAALAAIVLALALCFALRSGGLPR 356

Query: 360 SSDAL---PSRLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTV 416
              AL    +RLA  GYA+PG+V+A+G+L+P+  L         W G AG G+LLT S++
Sbjct: 357 LQAALLRLTARLAGMGYAIPGSVIAVGILLPVAWLQSL------WPG-AGLGVLLTASSL 409

Query: 417 ALVFAFCVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGA 476
            +++A+ VRF A+A+ SVES Y RI  SLD  + +LG S   +  RVH+PLL + L   A
Sbjct: 410 GVIYAYLVRFTAVAVQSVESGYTRIPASLDEAARSLGSSRAVIAWRVHMPLLWRSLAVAA 469

Query: 477 LLVFIESMKELPAALLLRPIGFENLATYVFQFVSDEKLEHGALPAIVIVLVGLVPLIYLN 536
           L+VF++ +KELPA LLLRP   + LA        DE+L   ALPA+ IVLVGL P++ + 
Sbjct: 470 LMVFVDVVKELPATLLLRPFDTDTLAVIAHNLARDERLGEAALPALSIVLVGLAPVLLVM 529

Query: 537 RSLE 540
           R+L+
Sbjct: 530 RALD 533