Pairwise Alignments

Query, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 534 a.a., iron ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  145 bits (365), Expect = 5e-39
 Identities = 135/506 (26%), Positives = 225/506 (44%), Gaps = 65/506 (12%)

Query: 17  AVLLVLPLL-----ALLLQAAQPDEAVFGHLLSTVLPTYIANSLWLILWVSIGSLLLALP 71
           A+L++LP+      A    AA+  + +F  L+  +L     N+L + +  ++ S ++   
Sbjct: 35  ALLVLLPIAFTFWCAASFGAAEAIDLIFRPLVGELL----INTLTITVSTTLVSAVIGTA 90

Query: 72  CAWLMARCEFVGRRYLQWALL--LPLAMPAYIVAYVYTDLLDYAGPVQRSLRALFGWSSP 129
            AW + R    GRR   WA+L   PLAMPA+I +Y +  L                    
Sbjct: 91  AAWFVERTHLPGRR--AWAVLSAAPLAMPAFISSYAWVSLSQ------------------ 130

Query: 130 QDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLAHASRIMGCSPWQSFWRLS 189
                 D++   GA  VL+   FP +YL    A       L  ++R +GC+ W +F R+ 
Sbjct: 131 ------DLQDFTGALLVLTCAYFPLVYLPVAAALRGMDPALEESARALGCNRWTTFIRVV 184

Query: 190 LPMARPALAVGVALVAMETAADFATVNYFAVPTLTTAVY---DTWLGYGNLTAAAKLSAI 246
           LP  RPAL  G+ LVA+   ++F         T TT +Y    T    G  +  A L  +
Sbjct: 185 LPQLRPALLGGMLLVALGVLSEFGAFTLLRFRTFTTQIYAEFRTSFDGGGASLLACLLIV 244

Query: 247 ILLVVFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSPMQTLLGLGYCGMLLLLAFVLPS 306
           I L+V +     R A R +++ +   R  A+  Y L   + ++  G   +L +    +P 
Sbjct: 245 ICLIVLAFEFRVRGAARYERVDRGTRR--AVLRYELGVWRWIVVAG-LALLSVTTLGVPL 301

Query: 307 GILLSYAINYFEQSWDP------LFWQLSVNSLTLALITSLVCCVIALVLMFIRRVSPRS 360
           G++  +       +  P      L +  +++SL   L  +L+  ++ + L F+    P  
Sbjct: 302 GMIGYWLTQPGAAAVTPADVSPELLFNATISSLGFGLAAALLTTLLVVPLAFLLVRYPTR 361

Query: 361 SDALPSRLASTGYALPGTVLAIGVLVPLTLLDFAINDIADWLGMAGPGLLLTGSTVALVF 420
              L  R       +PG V+A      L ++  A++ +            L  S   LV 
Sbjct: 362 FATLFERTVFLAQGVPGLVIA------LAIVSLAVHALQP----------LYQSATLLVI 405

Query: 421 AFCVRFVAIAIGSVESSYKRISPSLDMVSLTLGQSPRRLLQRVHLPLLTKGLFAGALLVF 480
           A+ + F+ +A+ SV +++ +  P L+  +  LG +  + L RV LPL   GL A A +VF
Sbjct: 406 AYSMLFMPLALVSVRAAFMQAQPRLEETARALGLNWSQTLLRVVLPLAGPGLGAAAAMVF 465

Query: 481 IESMKELPAALLLRPIGFENLATYVF 506
           I  + EL A LLL P+  + LAT V+
Sbjct: 466 ISVVTELNATLLLSPLDTQTLATQVW 491



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 23/204 (11%)

Query: 53  NSLWLILWVSIGSLLLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLLDY 112
           +SL   L  ++ + LL +P A+L+ R         +  + L   +P  ++A     L  +
Sbjct: 332 SSLGFGLAAALLTTLLVVPLAFLLVRYPTRFATLFERTVFLAQGVPGLVIALAIVSLAVH 391

Query: 113 A-GPVQRSLRALFGWSSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQSLNLA 171
           A  P+ +S   L                        S++  P   +  R AFM+    L 
Sbjct: 392 ALQPLYQSATLL--------------------VIAYSMLFMPLALVSVRAAFMQAQPRLE 431

Query: 172 HASRIMGCSPWQSFWRLSLPMARPALAVGVALVAMETAADF-ATVNYFAVPTLTTAVYDT 230
             +R +G +  Q+  R+ LP+A P L    A+V +    +  AT+    + T T A    
Sbjct: 432 ETARALGLNWSQTLLRVVLPLAGPGLGAAAAMVFISVVTELNATLLLSPLDTQTLAT-QV 490

Query: 231 WLGYGNLTAAAKLSAIILLVVFSL 254
           W     +  AA      LL   SL
Sbjct: 491 WADTSTMAFAAAAPYAALLTGISL 514