Pairwise Alignments

Query, 349 a.a., iron(III) ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 357 a.a., ABC transporter:TOBE from Pseudomonas syringae pv. syringae B728a

 Score =  261 bits (668), Expect = 1e-74
 Identities = 149/347 (42%), Positives = 203/347 (58%), Gaps = 12/347 (3%)

Query: 5   LNLHQVHSDYQGQQILKGLDLTLAQGEILALLGPSGCGKTTLLRAVAGLQAISQGEIQIN 64
           LNL  +   YQ Q++++ L+L L  G+I  LLG SGCGKTT LRA+AG + I  GEI + 
Sbjct: 6   LNLRNLACGYQNQRVVQDLNLHLNAGDIGCLLGSSGCGKTTTLRAIAGFEPIHAGEITLA 65

Query: 65  GKTVSGAGQFVPSEQRGIGMIFQDYALFPHLTVAENILFGVAKLTTAQRKARLDDMLA-- 122
           G+ +S  G  +P E+R IGM+FQDYALFPHL+VAENI FG+      +   RLD ++A  
Sbjct: 66  GEVISRPGWTLPPEKRHIGMVFQDYALFPHLSVAENIAFGI------RNHPRLDQVIAEL 119

Query: 123 --LVKLEGLAKRYPHELSGGQQQRVSIARALAYEPQLLLLDEPFSNIDAQVRHSMMAEIR 180
             LV L  L KRYPHELSGGQQQRV++ARALA EPQLLLLDEPFSN+D ++R  +  E+R
Sbjct: 120 LELVNLGALGKRYPHELSGGQQQRVALARALAPEPQLLLLDEPFSNLDGELRRRLSHEVR 179

Query: 181 SILKQRNVSAVFVTHSKDEAFVFADTLAIFSQGVIVQHGRAEDLYAAPNSRYVADFLGSG 240
            ILK R  SA+ VTH ++EAF  +D + +F +G + Q     +LY  P + +VA F+G G
Sbjct: 180 DILKARGTSAILVTHDQEEAFAVSDHVGVFKEGRLEQWDTPYNLYHEPRTPFVASFIGQG 239

Query: 241 NYLPAEVVDGHSVTTPIGQLRSLTPLSQSHAFNGQVFLRPQQLALSADDAGVGTITERRF 300
            ++  +++D  SV T +G LR              V LRP  +  +        +  R F
Sbjct: 240 YFIRGQMMDPQSVHTELGVLRGNRAYPGVSGTAVDVLLRPDDIVYAPHSDLKARVIGRTF 299

Query: 301 LGAFCHYWVKVEAASHAYYLEVRSQIMQFNVGQRVGLSTEPHSLVLF 347
            GA   Y +++   S      +         G+ VG+      LVLF
Sbjct: 300 QGASTLYRLQLSTGSQLE--AIFPSHADHGQGEEVGIRVAADHLVLF 344