Pairwise Alignments

Query, 747 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., Outer membrane vitamin B12 receptor BtuB from Xanthomonas campestris pv. campestris strain 8004

 Score = 85.5 bits (210), Expect = 8e-21
 Identities = 74/247 (29%), Positives = 120/247 (48%), Gaps = 32/247 (12%)

Query: 11  LAVASALPVWAEEQAKPLIN-EVIVVSGSRMEQNIEQVAGSILVIDEEAIERNMSNDFGS 69
           LAV  ++ V A  QA+  ++ + +VV+ +R  Q  +Q    + VID   IER   N    
Sbjct: 13  LAVCLSMCVAALAQAEAAVDLDQVVVTATRTAQTQDQTLAPVTVIDRAQIERRQINSLQD 72

Query: 70  LFRNESAVDI--KGGAGKPTSVTIRGIGGNRVMMVKDGVRVNNQYASPLGPGAEGTGRGL 127
           L R E+ V +   GG GK TS+ +RG   + ++++ DGVRV +         A   G  L
Sbjct: 73  LLRGEAGVSLANNGGPGKQTSLFLRGTEADHLVVLVDGVRVGS---------ATAGGAAL 123

Query: 128 TEV--QSLKQIEVVKAAASTMYGSDALGGVVVMRTKDASDYLRGEDYYVSLNAGYSGINN 185
            ++  + +++IE+V+   S++YGS+ALGGV+ + T+      R E  +V      +G +N
Sbjct: 124 QDIPFEQIERIEIVRGPFSSLYGSEALGGVIQLFTR------RPEGRFVPTFGAAAGSDN 177

Query: 186 --EYSGGFTSAAAYSDFENLLTYQ----HRKGEELPNYFDTQ-----PESD-LLQDSLLF 233
              YS G    +     E    Y     H + + +  Y DT+     P+ D    DSL  
Sbjct: 178 ARRYSAGVAGRSDGDLGERGGWYSVNAVHDETDGINAYLDTRSSSYDPDRDGYRNDSLNV 237

Query: 234 KSKYRFN 240
           +  +RFN
Sbjct: 238 QGGWRFN 244



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 676 AGYAVLDLTMGLHVTDNLHLRAGVYNLFDKEY 707
           AGY +LDL +   V  +  +     N+FD++Y
Sbjct: 571 AGYGLLDLRVSYAVNADWKVSLSANNVFDRQY 602