Pairwise Alignments

Query, 403 a.a., transposase, mutator family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., TRm3 transposase from Sinorhizobium meliloti 1021

 Score =  401 bits (1031), Expect = e-116
 Identities = 198/401 (49%), Positives = 278/401 (69%), Gaps = 5/401 (1%)

Query: 1   MPVSDQLIDQLLADYESPQDLLGEQGILRQLTKKLAERALEAEMELHLGYAKHDAAGFNT 60
           M +  +L+DQLLA  + P ++ G+ G+L  L K L+ER L AE++ HL   + +      
Sbjct: 1   MAIEKELLDQLLAGRD-PSEVFGKDGLLDDLKKALSERILNAELDDHLDVERLEGG---P 56

Query: 61  GNSRNGKSRKSVRSIHGDIELETPRDRNGSFEPKLIKKGEKQLGGFDERIVSLYARGMST 120
            N RNG S+K+V +    + L  PRDR G+F+PKLI + +++   FD++I+S+YARGM+ 
Sbjct: 57  ANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDDKIISMYARGMTV 116

Query: 121 RDIQAHFEETYGVEVSPTFISQITNAVLDEVKAWQLRPLAPVYPIVYLDCLVVRSRDSGS 180
           R+IQ H EE YG++VSP  IS +T+ VL+ V  WQ RPL   YP+V+ D + V+ RD G 
Sbjct: 117 REIQGHLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVFFDAIRVKIRDEGF 176

Query: 181 IQNKSVYLALGVNTDGEKELLGLWIAQTEGAKFWLSVMNELKNRGVEDIFIACVDGLKGF 240
           ++NK+VY+AL V  DG KE+LGLWI QTEGAKFWL VMNELKNRG +DI IA VDGLKGF
Sbjct: 177 VRNKAVYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGCQDILIAVVDGLKGF 236

Query: 241 PDAIEAVYPKTQVQLCIVHQIRNSLRFVSWKERKAVAADLKTIYGAATLQQAELALEQFA 300
           P+AI AV+P+T VQ CIVH IR+SL FVS+K+R+ V   L+ IY A   +    ALE F 
Sbjct: 237 PEAITAVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYRARDAEAGLKALEAFE 296

Query: 301 K-TWDKQHPSISKSWRENWTRLSVFFDYPPEIRKVIYTTNAIESLNASLRQVTKTRRSFP 359
           +  W +++P+I++SWR NW  +  FF +P  +R++IYTTNAIE+LN+ LR+  ++R  FP
Sbjct: 297 EGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEALNSKLRRAVRSRGHFP 356

Query: 360 SDDAVLKLLYLALHQIAKKWTMPLRDWKPAMTQFMIMYSDR 400
            D+A +KLLYL L+  A++W    R+W  A TQF +++ +R
Sbjct: 357 GDEAAMKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGER 397