Pairwise Alignments

Query, 145 a.a., stringent starvation protein b (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 158 a.a., ClpXP protease specificity-enhancing factor from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (387), Expect = 1e-42
 Identities = 77/145 (53%), Positives = 107/145 (73%), Gaps = 5/145 (3%)

Query: 4   LTPNRPYLLRAYYDWLMDNQLTPHVVVDAFVKGTQVPQQYVKDGQIVLNIAAGAVGNLQI 63
           +TP RPYLLRA+YDWL++N+LTPH+VVDA + G +VP +YV+DGQI+LN+A  AVGNL++
Sbjct: 10  MTPRRPYLLRAFYDWLLENELTPHLVVDATLPGVKVPLEYVQDGQIILNVAPRAVGNLEL 69

Query: 64  SNEFVEFNARFGGVPQQVLLPMASIVAIYARENGAGTVFDIEDAYL----VEDEAESTLS 119
            N+ V FNARFGG P  V++P+ ++ AIYARENGAGT+F+ E AYL      +E +S  S
Sbjct: 70  GNDEVTFNARFGGRPHLVIVPIYAVQAIYARENGAGTMFEPEPAYLDMMDFPEEIDSDDS 129

Query: 120 VIE-TAEKPTEPKDEPPKRRSHLTL 143
           +IE  ++   E  +E P+ R   +L
Sbjct: 130 LIELESDVAVEHTEETPRPRGKPSL 154