Pairwise Alignments

Query, 231 a.a., ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 281 a.a., cytochrome c1 from Caulobacter crescentus NA1000

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 53/244 (21%), Positives = 103/244 (42%), Gaps = 57/244 (23%)

Query: 34  DKASLERGLGLFQHYCSGCHSTQY---------------QRYERVANDLGISADDMRNKY 78
           D+  L+RG  +++  C+ CHS +                ++Y+   ++  + A     + 
Sbjct: 44  DQVQLQRGYKVYREVCASCHSMKLVSFRNLGDKGGPFYNEKYKNSNDNPWVKAIAKEYEV 103

Query: 79  MFTDAKIGELMQNA----------IPPKDAAKWF--GATPPDLTLVARVR--GEDWVYSY 124
              D++ G+ ++             P + AA+    GA PPD++L+A+ R  G D++YS 
Sbjct: 104 ADIDSETGDPIKRPATSADHFPAPFPNEIAARGANGGALPPDMSLLAKARANGPDYIYSL 163

Query: 125 LKGFYKDPS----------RPFGVNNTV---------FPSVGMPHVLEELQGTPVKQEDG 165
           L G+   P+           P+   +            P  G   + + L+   V  +DG
Sbjct: 164 LVGYVNPPAGLKIGPGQHYNPYMAGDLTAYWSGSHEKVPPGGFIAMAQPLKDGQVTFDDG 223

Query: 166 TIVVSGGKLNAEEYDQAVRDITGFLVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKE 225
           T             DQ  +D++ FL+++AEP   +R+  G+ V+ +L +   + Y   K 
Sbjct: 224 T---------KSTLDQQAKDVSAFLMWAAEPKLEQRKQTGFAVIIYLLLLSGLLYASYKR 274

Query: 226 YWKD 229
            W++
Sbjct: 275 VWRN 278