Pairwise Alignments

Query, 231 a.a., ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 281 a.a., cytochrome c1 from Castellaniella sp019104865 MT123

 Score =  166 bits (421), Expect = 3e-46
 Identities = 104/281 (37%), Positives = 150/281 (53%), Gaps = 53/281 (18%)

Query: 1   MKKLLIAL-VTLLPTLAIAAGGQVHLEDANVDLHDKASLERGLGLFQHYCSGCHSTQYQR 59
           +KKLL AL ++L  TLA A GG  HL+ A   + D A+L+ G  LF +YC  CHS    R
Sbjct: 2   IKKLLGALALSLTCTLAFAEGGP-HLDRAPDRITDLAALQNGAKLFVNYCLNCHSANSMR 60

Query: 60  YERVANDLGISADDMRNKYMFTDAKIGELMQNAIPPKDAAKWFGATPPDLTLVARVR--- 116
           Y ++  DLG++ ++++   +F+  KIG+LM  ++ P DA KWFGA PPDL+++AR +   
Sbjct: 61  YNKLM-DLGLTENEIKKNLLFSRDKIGDLMTVSMTPADAKKWFGAAPPDLSVMARAKNTN 119

Query: 117 ----GEDWVYSYLKGFYKDPSRPFGVNNTVFPSVGMPHVLEELQG--------------- 157
               G D++Y+YL+ FY+D S+  G NN VFPSV MP+ L EL+G               
Sbjct: 120 FGPSGVDYIYTYLRSFYRDTSKKTGWNNVVFPSVAMPNALWELEGPRSYTDITVHQVADA 179

Query: 158 ---------TPVKQEDGTIVV-------------------SGGKLNAEEYDQAVRDITGF 189
                    T V    G   V                   S  +    +++  V DI+ F
Sbjct: 180 KGAEHWQRTTTVYDAAGFPTVKNETLTDYTGEASTTGRFDSADQKTFSQFESNVADISNF 239

Query: 190 LVYSAEPVKLERQALGWWVLGFLFIFFIVAYLLKKEYWKDV 230
           L + +EP +LER+ +G WV+ FLF+F  VA  + K YWK V
Sbjct: 240 LGWMSEPGQLERKQIGVWVMLFLFLFLFVAIRMNKAYWKHV 280