Pairwise Alignments

Query, 631 a.a., DNA mismatch repair protein MutL (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., DNA mismatch repair protein MutL from Pseudomonas stutzeri RCH2

 Score =  401 bits (1031), Expect = e-116
 Identities = 241/574 (41%), Positives = 337/574 (58%), Gaps = 38/574 (6%)

Query: 3   IQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSG 62
           IQ+L P+LANQIAAGEVVERPASV+KEL+ENSLD+GASRI++++++GG KL+++RD+G G
Sbjct: 7   IQLLSPRLANQIAAGEVVERPASVIKELLENSLDSGASRIEVDVEQGGVKLLRVRDDGCG 66

Query: 63  IPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQ 122
           IP ++L LAL+RHATSK+  L+DLE ++S GFRGEALASISSVSRLT+TSRTA+ SEAWQ
Sbjct: 67  IPPDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVSRLTMTSRTADASEAWQ 126

Query: 123 AYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVR 182
              EG EM  +V PAAHPVG+++EV DLFFNTPARR+FL+++KTEF H+ E +KR+AL R
Sbjct: 127 VETEGREMEARVQPAAHPVGTSVEVRDLFFNTPARRKFLRTEKTEFDHLQEVIKRLALAR 186

Query: 183 GDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYLQS 242
            D+ F L HNGK V     A ++    +R+  V G  F ++AL +E + + LRL G++  
Sbjct: 187 FDVAFHLRHNGKAVLALHQASDDASRARRVAAVCGSAFLEQALPIEIERNGLRLWGWVGL 246

Query: 243 P-WSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKA-EVEQPGYVLMLDIDPHQVDVNV 300
           P +S    D  YFYVNGR+VRD+LV HAVRQA+         P +VL LD+DP  VDVNV
Sbjct: 247 PTFSRSQADLQYFYVNGRMVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLDVDPAVVDVNV 306

Query: 301 HPAKHEVRFHQSRYVHDYILQALQSALEEAGELRFEPHSPQIDDSSPYVKPETESSAFEL 360
           HP KHEVRF  SR VHD++   L  AL +                   V+PE + +A   
Sbjct: 307 HPTKHEVRFRDSRMVHDFLYGTLHRALGD-------------------VRPEDQLAAPAS 347

Query: 361 QSTESNAKYLGIDTTG---ERQAEARVVEYRSSDMPKMRTGTAVQSNAFGSMSVPRETRS 417
            ++ +    L     G   E    A V+E    + P  R        A      PR   +
Sbjct: 348 VTSMTQVSGLAAGEFGGQNEMSLAASVLERPPGETPAWR-------GAGAGYQAPRPAAA 400

Query: 418 GSSGESRPRAELPSKTAIASYGALLQTPSYSVQDKAYQPTLPMPSILDGQFWVFTDGPKL 477
           G + E++            S  A L      V    Y         L G + +  +   +
Sbjct: 401 GYTAETQGAYRELFTPLPESGPAALPASQDDVPPLGYALAQ-----LKGVYILAENAQGM 455

Query: 478 SLLRIESVALATRSDEIETKLAT-GLIGQPLLMPVSVAADTDWSSLLDEHATLIRQLGLE 536
            L+ + +       + ++T +A+ GL GQPLL+P S+A     +   +EH    + LG E
Sbjct: 456 VLVDMHAAHERITYERLKTAMASEGLRGQPLLVPESIALSQREADCAEEHGQWFQMLGFE 515

Query: 537 L-TIRYQQLIIKKVPPYLRDCQLARVIPEWLQSL 569
           L  +  + L I+++P  L+  +  +++ + L  L
Sbjct: 516 LQRLGPETLGIRQIPSLLKQAEATQLVRDVLADL 549