Pairwise Alignments

Query, 298 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., Protein of unknown function (DUF3530). from Pseudomonas stutzeri RCH2

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 80/315 (25%), Positives = 128/315 (40%), Gaps = 41/315 (13%)

Query: 15  STQAPETSPQPTPADSQASAPIQPKRTSNYLPANEIKQITIDNQPLEL-----LVRSWEG 69
           + Q PE + Q  P D        P+  S  L A   +Q+    Q L+L      +  W+ 
Sbjct: 24  AAQEPE-AVQEAPVDEPKVQRPAPQMRSEALAAGLQRQLDAVAQ-LQLGEEDRFLALWQP 81

Query: 70  R---KKLGAAIILPATNGTADAPGLMAFVRRNINAAGWASLSLTPPTE--PPAPNFATP- 123
               K  G  +I+P+   TAD P  +  +RR +   GW +LSLTP      P P   TP 
Sbjct: 82  ANTAKARGVLVIVPSEGETADWPRAIGPLRRGLPEHGWHTLSLTPADAALTPGPRIPTPP 141

Query: 124 -ATEV---------------TTAGSA----QLTSPSNKPSQKVKPEDSNKHLIEQEDFLV 163
            ATE                +  GSA    + T+P++      +P  +N++ +EQ     
Sbjct: 142 AATEAPDTQEAPDADETGLPSEPGSAGYLPEQTAPADSDGPATEPPQANEN-VEQPSHAE 200

Query: 164 KSMSQLDSVGADFPGKR----VLITADQSAGLLISLLSQKKIADPDVLIVINPYSEDETR 219
           +  +++D+        +    VL+     A      ++Q +  D   L+VI+P +     
Sbjct: 201 RMQARIDAAIEHARTLQAPTIVLVGHGTGAYWASQYMAQLQPKDVGQLVVIDPRT-PPMP 259

Query: 220 NQAIAEKLAKLTMPILDIQSPDGHPASLETAAQRKTLAVTLETPNYRQTTLV-LNLDNES 278
            Q +   LA L + + D    D  PA+ E A QR+  A      +YRQ  L  L  D   
Sbjct: 260 EQPLEAYLATLAVDVGDFYMND-RPAAQEQAMQRRNAARRAGHRDYRQVALTNLTGDRHY 318

Query: 279 AWQNCLTAIRGFAAR 293
             +  +  +RG+  R
Sbjct: 319 EQEQLVRRVRGWLDR 333