Pairwise Alignments

Query, 324 a.a., sensory box/GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 753 a.a., diguanylate cyclase with PAS/PAC sensor from Marinobacter adhaerens HP15

 Score =  125 bits (313), Expect = 4e-33
 Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 12/196 (6%)

Query: 118 LASLTGKITHISVIVYDVTDIAVNKLQLKAANEQLERLSQTDGLTQLHNRRHWQQCLEHE 177
           LA+L   I  IS+ +  +           A  E+L++ S  DGLT L NRR++ Q  EHE
Sbjct: 563 LAALDQAIQRISITLSSI-----------ALREELQKFSYEDGLTGLKNRRYFDQLFEHE 611

Query: 178 YDLYARYSGIASLVMIDIDHFKNINDTYGHLAGDKVIQHIAHILSHSLRETDCAGRYGGE 237
             +  R     SL++IDIDHFK  NDT+GH AGD  ++ +A IL    RE+D   RYGGE
Sbjct: 612 SAVAQRNDLPLSLLIIDIDHFKKFNDTHGHEAGDNALKIVAGILQKQFRESDLVCRYGGE 671

Query: 238 EFAVVMPSTCGADALNFTERLREKIASSTVVYEGLKI-KVTVSLGVCELGKHISSSSSWI 296
           EF VVMP      A++   +L   +    +++    +  +TVS+GV    +        +
Sbjct: 672 EFVVVMPGATSEAAMDKASQLSSAVRDVAIIHREKDLGALTVSVGVASWPESGEKPLQIL 731

Query: 297 SCSDKALYEAKQKGRN 312
           + +D+ALY AK+ GRN
Sbjct: 732 TLADRALYRAKEAGRN 747