Pairwise Alignments

Query, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 90 a.a., Bacterial nucleoid DNA-binding protein from Pseudomonas stutzeri RCH2

 Score =  103 bits (257), Expect = 4e-28
 Identities = 53/90 (58%), Positives = 66/90 (73%)

Query: 1  MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60
          MNK+ELI  IA +ADI KA A RAL +   ++T ++K GD + +VGFG+F    RAARTG
Sbjct: 1  MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTG 60

Query: 61 RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90
          RNPQTGK I IA A +P FKAGK L+D+VN
Sbjct: 61 RNPQTGKPINIAAAKIPGFKAGKALKDAVN 90