Pairwise Alignments

Query, 90 a.a., DNA-binding protein, HU family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 123 a.a., DNA-binding protein HU-beta from Xanthomonas campestris pv. campestris strain 8004

 Score =  100 bits (250), Expect = 4e-27
 Identities = 49/90 (54%), Positives = 68/90 (75%)

Query: 1   MNKTELIAKIAENADITKAQATRALKSFEAAITESMKNGDKISIVGFGSFETTTRAARTG 60
           MNKTELI  +A  ADI+KA+A RA+ +  + IT+++K GD +++VGFG+F+   RA RTG
Sbjct: 34  MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGDAVTLVGFGTFQVRERAERTG 93

Query: 61  RNPQTGKEIQIAEATVPKFKAGKTLRDSVN 90
           RNP+TG  I+IA +  P FKAGK L+D+VN
Sbjct: 94  RNPKTGDSIKIAASKNPAFKAGKALKDAVN 123