Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 775 a.a., ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  105 bits (261), Expect = 1e-26
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 15/238 (6%)

Query: 487 ELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDNTNENVQKYLGLIQNRIQRM 546
           EL R N EL+ FAY+A+HDLK PLR IE     L++ L+      +   +  I+   +R+
Sbjct: 530 ELSRSNDELESFAYVAAHDLKEPLRHIEAFAGLLNDLLLPEARSRLSLMVNGIEASSRRL 589

Query: 547 VRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDMFALVAP--PQGFELVLEGDFPHFKTVKT 604
             L++ L  +SRIGR    +  VD  Q++ ++ + + P        V+    P      +
Sbjct: 590 RALINDLAEYSRIGRQARPLQPVDLNQILTEVLSDLKPMLQDARAEVVSEPLPTVLCDGS 649

Query: 605 LLELVVRNLISNAIKHHDRGFGVLKVLCETKNT------------YYWFSVVDDGPGISS 652
            +  +++NLISNA+K+ D        +  T ++                ++ D+G G   
Sbjct: 650 QIRQLLQNLISNAVKYRDAERLPHVTIAATIDSPPPAAPAGANVRRARITIADNGIGFDE 709

Query: 653 EFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLES-VGRGCCFRFSWPI 709
           +++ ++FE FQ L   DE +G+G+GL++ +K V   GG I   S VG G  F F+ P+
Sbjct: 710 QYREQIFEPFQRLHGPDEYQGTGIGLAICRKIVHRHGGTISATSRVGEGSVFTFTLPL 767