Pairwise Alignments

Query, 717 a.a., sensory box histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 592 a.a., ATP-binding protein from Dyella japonica UNC79MFTsu3.2

 Score =  124 bits (311), Expect = 1e-32
 Identities = 129/487 (26%), Positives = 222/487 (45%), Gaps = 38/487 (7%)

Query: 247 GIMGKRFSGIKLAIYDGSEANRTHLMFSSDPKLPSSKDVFYQSQLETMEGQVWRIDVSSE 306
           G +G   SG +LA+ D     +  L +       +++ +     L  M+  +  I  S +
Sbjct: 106 GALGSMVSG-RLALLD-----QAMLHYRQGDVRAANEALRDSGTLFKMDDLIDGIVQSED 159

Query: 307 SRFISRAEQTR------SVWLQVIGCAFILALFYAVISMARNRYQESMLTAELIANE--K 358
              ++R  Q R      S+ L +   A +L L  A++ +   R     L AE    +  +
Sbjct: 160 DTLLARRSQARAASSNSSLALTITATAQMLLL--AIVVIVSERQISRRLQAEEREGQAVQ 217

Query: 359 RFRLIIEASPSALFMVDKTGVITLVNTQGERLFGYTREELLGRSINMLLPETLREIH-QQ 417
           R +LI++A    + ++D      LVN     L+G          +  +     R+   QQ
Sbjct: 218 RSQLIVQAVREPIALLDSKLCTLLVNAAFGELYGIPPSNRHSLPLVEIGDGAWRDSALQQ 277

Query: 418 HLSHYLVHPIAKNMSMRD-DLLGCCKDGTPLAVEVGLTPVHFSNG--IYILTTINNISER 474
            L+  L+     +  + D +LL    DG    V +    +   +G    +L T+++++ R
Sbjct: 278 RLNDVLL----LDRELWDYELLQRTVDGVDRHVVINARRLQQDDGGEPVLLLTVSDVTAR 333

Query: 475 KRIEAQRIE-------HMAELERINQELDRFAYIASHDLKSPLRGIEQLTTWLSEDLVDN 527
             +E Q  E        +A++  +N+EL+ F+Y  SHDL++PLR I    + L + L + 
Sbjct: 334 ALVEQQVKELNRQLEGKVAQVSDVNRELEAFSYSVSHDLRAPLRHIAGFASKLEQHLGEG 393

Query: 528 TNENVQKYLGLIQNRIQRMVRLLDGLLTFSRIGRVDNEMVEVDSRQLVEDMFALVAPPQG 587
            ++  Q Y+ +I +  +RM +L+D LL FSR+GR    +  VD + L E+   L      
Sbjct: 394 ADDKSQHYIDVISDAARRMAQLIDDLLVFSRLGRGALRLQPVDMQSLAEEARVLAESEVH 453

Query: 588 FELVLEGDFPHFKTV--KTLLELVVRNLISNAIKHHDRGFGVLKVLCETK---NTYYWFS 642
              +L    P    +  + +L  V +NL+ NA+K+  +   V  +  E +   N  Y F 
Sbjct: 454 GRRILWSIAPLPIVIGDENMLRTVWQNLLGNAVKYTGK-VEVAHIGVEMRRGDNGDYEFV 512

Query: 643 VVDDGPGISSEFQLKVFEMFQTLRPRDEVEGSGLGLSLVKKTVDSLGGKIQLE-SVGRGC 701
           V DDG G   ++  K+F +FQ L    E  G+G+GL+ V++ V   GGK+  E S G G 
Sbjct: 513 VSDDGAGFDMQYSGKLFGVFQRLHRASEFPGNGIGLANVRRIVQRHGGKVWAEGSPGEGA 572

Query: 702 CFRFSWP 708
            F F+ P
Sbjct: 573 RFHFTLP 579