Pairwise Alignments

Query, 478 a.a., metallo-beta-lactamase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 469 a.a., Predicted exonuclease of the beta-lactamase fold involved in RNA processing from Pseudomonas stutzeri RCH2

 Score =  374 bits (959), Expect = e-108
 Identities = 206/444 (46%), Positives = 282/444 (63%), Gaps = 6/444 (1%)

Query: 3   LQFLGAAREVTGSCHLV-TVAGKHLLLDCGLIQGGKADELRNHEPFVFDPQTIVAVVLSH 61
           L FLGA ++VTGSC+L+ T  G  +LL+CG+ QG + +E  N   F FDP T+ AVVLSH
Sbjct: 4   LSFLGAIQQVTGSCYLIETHDGIRVLLECGMHQGRREEESDNRAAFAFDPTTLDAVVLSH 63

Query: 62  AHIDHSGRLPLLVKAGFDGPIYTHKATAELCAIMLKDAAMLQVRDTERTNKKRAKHDLAP 121
           AHIDHSG LP LV  G+ GP++   ATAEL  +ML D+A +Q +D E  NK RA+     
Sbjct: 64  AHIDHSGLLPRLVALGYRGPVHCTDATAELLELMLLDSAQIQEKDAEWENKWRARIGKPM 123

Query: 122 LEPLFTVEDAEQAISQFVSLEYGQVTRVIPHVDICLSDAGHILGSALVELWLGEGKSQKK 181
           ++PL+T  DAE+ +SQ     YG+   V   V +   DAGHILGS++V++ + +    ++
Sbjct: 124 IQPLYTRVDAERMLSQREPHAYGETFEVAQGVVVTFHDAGHILGSSIVQMDVSDHGRTRR 183

Query: 182 IVFSGDLGRAGMPILQNPTLVDTADLVLMESTYGNRFHRSWTDTLAELKDIFAKTVNESQ 241
           +VFSGDLG A  P++  PT++  AD+VLMESTYG+R HRS  DT+ EL  I  +  +   
Sbjct: 184 LVFSGDLGNACSPLMHPPTVLKEADVVLMESTYGDRDHRSHEDTVEELAGIL-QQAHRDG 242

Query: 242 GNILLPAFSVGRAQELLYLFHLYAKEWDLGRWKICLDSPMAIEATRVYVNNYPLMD---- 297
           GN+L+P+F+VGR Q+L+Y    + +E  L +  + LDSPMAI A  +Y +    +D    
Sbjct: 243 GNVLMPSFAVGRTQDLIYYLGRFYREGRLPQQAVFLDSPMAIGANAIYSHYKDQLDLNGI 302

Query: 298 EDFKRFTRQHPGQHPLLSNVEFIQTTEESIALNEVHKGLIIIAGSGMCNGGRIRSHLEHN 357
           +     T         L  ++   T EES+A+N    G+IIIAGSGMC GGRI  H +HN
Sbjct: 303 DAALSGTSGKLYAERWLPILKPTPTPEESMAINRFKSGVIIIAGSGMCTGGRILHHFKHN 362

Query: 358 LWRSECDVIICGFQALGTPGRALVDGAKELTIHGNSVNVAAKLHTVGGLSAHADQAELLR 417
           LWR EC ++I GFQA GT GRA+VDGA  + +    + V AK+HT+GG SAHA Q++L+ 
Sbjct: 363 LWREECHLVIPGFQARGTLGRAIVDGAGSVKLLHQRIAVNAKIHTLGGFSAHAGQSQLID 422

Query: 418 WYRHFEEQPPLVLVHGEPEAQQGL 441
           W  +FE +P L LVHGE E  Q L
Sbjct: 423 WVSNFENRPELYLVHGELEKMQVL 446