Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., TRAP transporter solute receptor, TAXI family (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (391), Expect = 2e-42
 Identities = 105/319 (32%), Positives = 152/319 (47%), Gaps = 11/319 (3%)

Query: 9   AVSAALTLSL------SAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGT--GIEGAK 60
           AV  ALT++         A +AA P  + I TGG +GVYYP G A+ ++        G +
Sbjct: 6   AVLFALTVAAMPAGFGGGAALAADPRIVTIGTGGVTGVYYPAGGAICRMVNKHRAEHGIR 65

Query: 61  TSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPNY 120
            +V+AT  SVENL  L+AG  +L +A  D V  A++G A    +     +R L   +   
Sbjct: 66  CAVEATDGSVENLESLRAGDLDLGIAQADWVHHAWEGGAKYQNRAAFAGLRTLLELHAES 125

Query: 121 IQIVASKESGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFLPYAES 180
             +VA K +GI+T  DLKG+R+S+G   SG    A  +  A   + +D   V  +  AE 
Sbjct: 126 FTVVARKATGIRTFDDLKGRRVSLGITGSGQRATAEVLLAAMDWTLKDFSAVPEVKPAEQ 185

Query: 181 VELIKNRQLDATLQSSGLGMAAIRDLATTMPINFVEVPE--DVILKINNPAYQHGVIPAS 238
              + + ++DA +   G    AI +  T+    FV V       L   NP Y   VIPA 
Sbjct: 186 SAALCDDRVDAIIYVVGHPNGAIIEATTSCDAGFVAVDNAGTASLIAENPFYAKTVIPAK 245

Query: 239 TYEGQTADVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSA-AKAIQLDKAT 297
            Y G  AD  T  +    V    + DD+AY + K + E+ D     H A A  ++     
Sbjct: 246 LYRGNPADTPTFGVHATLVATAALPDDVAYALVKAVMENFDDFRKLHPAFAGLVRESMVP 305

Query: 298 KNLPAPLHPGAERYFKEVG 316
                P+HPGA RYF+E+G
Sbjct: 306 AQSTVPVHPGALRYFQEIG 324