Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 462 a.a., TAXI family TRAP transporter solute-binding subunit from Rhodopseudomonas palustris CGA009

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 82/324 (25%), Positives = 131/324 (40%), Gaps = 23/324 (7%)

Query: 5   KRFIAVSAALTLSLSAATMAA-----APAFINILTGGTSGVYYPIGVALSQLYGTGIEGA 59
           +R + +  A TLSL     A       P  + I  G  +G  Y +  AL+Q++       
Sbjct: 11  RRMLLIILATTLSLIGIASAGYYFAMRPVTLKIAVGPQAGDDYKLIQALTQVFARERNTV 70

Query: 60  KTSVQATKASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPN 119
           +     T     +   L++G  +LA+  GD +    Q  + A   K +  +   A+  P 
Sbjct: 71  RLRPVVTDGPAASALALKSGAVDLAVIRGD-LPVPKQAQSVAVLHKNVAVLWAPASQQPK 129

Query: 120 YIQIVASKESGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFL--PY 177
             +   SK +GI  + DL GKR+ V      TE NA  +         D  KV+ L  P 
Sbjct: 130 GKR-KGSKTAGIAGITDLTGKRVGV---VGRTEANAGLLTVILQQYGVDPSKVQTLSVPV 185

Query: 178 AESVELIKNRQLDATLQSSGLGMAAIRDLATTM------PINFVEVPEDVILKINNPAYQ 231
           AE  + ++  ++DA L +  L    I D           P+ F+ +     L  N+P+Y+
Sbjct: 186 AEVADAVRTGKVDALLAAGPLNSKIIGDAVAATAHTGREPV-FLSIESSEALAANHPSYE 244

Query: 232 HGVIPASTYEGQTA----DVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSA 287
              IPA  + G  A    +V TV+  +  V + G SD      T+ +F     +      
Sbjct: 245 AASIPAGAFGGAPARPDNEVKTVSFSHYIVAREGASDTTIATFTEQLFTARQIVIGEVPL 304

Query: 288 AKAIQLDKATKNLPAPLHPGAERY 311
           A  I+     K+   P+ PGA  Y
Sbjct: 305 AAKIETPDTDKDAVIPVQPGAAAY 328