Pairwise Alignments

Query, 318 a.a., immunogenic-related protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 322 a.a., TRAP transporter solute receptor, TAXI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  166 bits (419), Expect = 9e-46
 Identities = 101/315 (32%), Positives = 160/315 (50%), Gaps = 6/315 (1%)

Query: 9   AVSAALTLSLSAATMAAAPAFINILTGGTSGVYYPIGVALSQLYGTGIE--GAKTSVQAT 66
           A+ AA T +L   ++AA   FI I TGG +GVYYP G A+ +L        G +  V++T
Sbjct: 8   ALVAAAT-ALGGGSVAAQDTFIAIGTGGVTGVYYPTGGAICRLVNRNRSEHGIRCGVEST 66

Query: 67  KASVENLNLLQAGRGELALALGDSVAAAYQGDADAGFKKPLDKVRVLAAAYPNYIQIVAS 126
             SV N+N ++ G  E  +A  D    A+ G +    + P + +R + + +P    +VA 
Sbjct: 67  GGSVFNINAIRGGELEFGVAQSDWQFHAFNGTSRFEEQGPFEDLRAIFSVHPEPFTVVAR 126

Query: 127 KESGIKTLADLKGKRISVGAPKSGTELNARAIFKAAGLSYEDMGKVEFLPYAESVELIKN 186
            ++GI+T  DLKGKR++VG P SG       + +A G + +D      L  AE  + + +
Sbjct: 127 ADAGIETFEDLKGKRVNVGNPGSGQRGTMEVLMEAMGWTMDDFAVASELQAAEQSQALCD 186

Query: 187 RQLDATLQSSGLGMAAIRDLATTMPINFVEVPEDVI--LKINNPAYQHGVIPASTYEGQT 244
             +DA + + G    +I++  T      V V  D +  L  +N  Y+   IP   Y G  
Sbjct: 187 NNIDAMIYTVGHPSGSIQEATTACDSVLVTVANDAVDQLVADNSFYRTATIPGGMYRGTD 246

Query: 245 ADVSTVAIQNLFVTQTGVSDDLAYQMTKLMFEHLDRLGNAHSA-AKAIQLDKATKNLPAP 303
            D  T  +   FV+   V +++ Y++ K +F+++D+    H A A     + A   L AP
Sbjct: 247 EDTMTFGVGATFVSSMAVPEEVVYEVVKAVFDNIDQFKGLHPAFANLDAKEMANDGLSAP 306

Query: 304 LHPGAERYFKEVGAL 318
           LHPGAERYF+E G +
Sbjct: 307 LHPGAERYFREAGLI 321