Pairwise Alignments

Query, 856 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

 Score =  222 bits (565), Expect = 1e-61
 Identities = 172/584 (29%), Positives = 278/584 (47%), Gaps = 38/584 (6%)

Query: 273  SVYRPVTSEGNEELSVLANRVNSLLARIYQQKERG----KITLESIAEAVILTDIEAKVI 328
            S++R +T          A R +  ++R  +  E         LES  ++V+L D + +V 
Sbjct: 501  SIWRDITD---------AKRASDEISRAQRHAEAAADQLSSVLESTMDSVMLLDADWRVR 551

Query: 329  YMNPKAETLLEVASSNAVGESLASLLKAGEQLNQAVFHCIRLGETMPQVAKIKLLTTMPR 388
            Y+N  A  LL+V    A+G     L    E+ + A  HC  + +   +      L+++ R
Sbjct: 552  YLNENARKLLQVGDE-ALGRVFWKLFPEEEEGSFAK-HCREVMDRRVRSFFEDHLSSLGR 609

Query: 389  IIERSISNVLNHEKEIVGTVVVLRDITQEE-------LLKHQLQKRANFDGITGLLNRQA 441
             +E + S   +      G  +  RDIT+         L + Q+   A  D +TGL NR  
Sbjct: 610  WVEANASPTRD------GISIFCRDITERRRAEEDTLLAQKQMAHMARHDMLTGLANRMF 663

Query: 442  FEEQLPEFASQARS--LAVCYLDLEQFKLINDSCGHTAGDRMLAMVARAIQSCLGPQELL 499
            F E   E  +++    +AV  LDL+ FK +ND+ GH AGD +L  V+  +   +   E +
Sbjct: 664  FRECFEEALNESNHARMAVLCLDLDGFKAVNDTLGHPAGDALLRQVSTRLIQAVRTTETV 723

Query: 500  ARIGGDEFGLVICDRTALAVAQLLKQIIAQVSLQVLHDKNCNYKVGLSIGVAFGRAPYIN 559
            AR+GGDEF ++     +   A  L Q +     +    +     VG SIG+AF      +
Sbjct: 724  ARLGGDEFAIIQPLTESRDEAFRLAQRLIDTLSEPFSIEGAAANVGTSIGIAFAPEDGTS 783

Query: 560  AQELLKDADIACIAAKAKGTNQIHIYDDKDKELTYQRNAPKWAVRIAQAIEENELLLYYQ 619
            A EL+K ADIA  +AK+ G     ++D             K  +R   A+ + E  L+YQ
Sbjct: 784  ADELIKAADIALYSAKSSGRGTYKLFDVAMHAQLQAHQQMKITMR--DALAKGEFELHYQ 841

Query: 620  PIRGLGASSKRQRMEVLLRIQEPCGRILAPAQFIAAAERFKLMPEIDKEVIRKAFLWLSL 679
            P+  L  S      E LLR + P   ++AP++FI  AE   L+  I + ++ +A      
Sbjct: 842  PLVSL-ESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGLIVPIGEWILGEA----CR 896

Query: 680  NSQLWQDHC-ISINLSGNSLGAEGMVEYIAKQQQIFDIPSQCVCFEITETTAIQNRHRGM 738
             +  W +   +++NLS        +V  +AK      +    +  EITET  +      +
Sbjct: 897  QAARWPERVSVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLEITETVLLDESEHNL 956

Query: 739  EMLRQLRKLGFSFALDDFGSGFASYGYLRELPVDYVKIDGCFVKNLAVNAKDYAIVKSIQ 798
            E+L+ LR+LG   A+DDFG+G++S GYLR  P D +K+D  FV++L    +  AIVK++ 
Sbjct: 957  ELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVA 1016

Query: 799  DVCRVMGIETVAEFVENQEIIDRLQTIGINYAQGYAIGRPQPLA 842
             + + +G+ T  E VE ++ +  + + G N  QGY   RP P A
Sbjct: 1017 GLGQSLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAA 1060