Pairwise Alignments

Query, 856 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1253 a.a., signal transduction protein containing a membrane domain, an EAL and a GGDEF domain from Marinobacter adhaerens HP15

 Score =  233 bits (595), Expect = 4e-65
 Identities = 141/433 (32%), Positives = 242/433 (55%), Gaps = 15/433 (3%)

Query: 423  QLQKRANFDGITGLLNRQAFEEQLPEFAS------QARSLAVCYLDLEQFKLINDSCGHT 476
            +L  +A  D +TG ++R  FE+Q+ +  S      +  + A+  LD+++F +IN S G  
Sbjct: 809  KLNFQATHDALTGCMHRHDFEKQVSQLISILPSSAEDHAAALMVLDIDEFSVINASYGAD 868

Query: 477  AGDRMLAMVARAIQS---CLGPQELLARIGGDEFGLVICDRTALAVAQLLKQIIAQVSLQ 533
            AGD +L  VA  ++        +  + RI G+EF ++I + +        + +       
Sbjct: 869  AGDALLRHVADTLRKQSESRFSESHVGRISGNEFAVLINNISTEDCLDFAESLRRNFEQH 928

Query: 534  VLHDKNCNYKVGLSIGVAFGRAPYINAQELLKDADIACIAAKAKGTNQIHIY-DDKDKEL 592
            V       Y+  +SI +        +  +LL  A ++  AAK  G N+I +  +++D+  
Sbjct: 929  VFRHGQAEYRATVSISIRPVTGAGQSPGDLLNLASLSLKAAKKLGGNRIELARENRDQS- 987

Query: 593  TYQRNAPKWAVRIAQAIEENELLLYYQPIRGLGASSKRQRM-EVLLRIQEPCGRILAPAQ 651
              +   P+W   I + I +  L L  QPI  L        M EVLL +++  G+ ++P  
Sbjct: 988  --RLGTPQWVTEIDRTIRDGSLYLRAQPIVALEPEDGEGTMYEVLLGLKDSSGKEISPQG 1045

Query: 652  FIAAAERFKLMPEIDKEVIRKAFLWLSLN-SQLWQDHCISINLSGNSLGAEGMVEYIAKQ 710
            +I AAE+FK    +D  VI +   W+  N + L +   +++NLSG+SL  +  +  +   
Sbjct: 1046 YIEAAEQFKRSTRVDLWVISEVLTWMRDNPAALARIATLNVNLSGSSLSDDSFMLGLESN 1105

Query: 711  QQIFDIPSQCVCFEITETTAIQNRHRGMEMLRQLRKLGFSFALDDFGSGFASYGYLRELP 770
             +     +  +CFE+TET+A+ N H   + +R++++L   FALDDFG+G +SY YL++LP
Sbjct: 1106 LRANPELAHKLCFEVTETSAVANLHFASDFMREMKRLNCRFALDDFGTGLSSYAYLQKLP 1165

Query: 771  VDYVKIDGCFVKNLAVNAKDYAIVKSIQDVCRVMGIETVAEFVENQEIIDRLQTIGINYA 830
            VD+VKIDG FVK++A N  +YA+V+SI ++C  + ++T+AE+VE+ EI+D L+ I ++YA
Sbjct: 1166 VDFVKIDGIFVKDMATNLTNYAMVRSINELCHFLDLQTIAEYVEDMEIMDTLREIQVDYA 1225

Query: 831  QGYAIGRPQPLAS 843
            QG+AI +P+ L S
Sbjct: 1226 QGFAIAKPRRLDS 1238