Pairwise Alignments

Query, 856 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 809 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  209 bits (531), Expect = 7e-58
 Identities = 178/648 (27%), Positives = 310/648 (47%), Gaps = 43/648 (6%)

Query: 231 VSLAVILLGILIVALGYVWLRACLLQPFKSLMQQLALVDPMASVYRPVT-------SEGN 283
           V L    L    V++  +W+    +    + M   A    + +  +P+T       S  N
Sbjct: 161 VILLTQFLKTFFVSILIIWIFQHFVARHLTTMANYARDFSLTTTSKPLTLERPNTPSNRN 220

Query: 284 EELSVLANRVNSLLARIY-----QQKERGKI-----TLESIAEAVILTDIEAKVIYMNPK 333
           +EL  + + +N +  R+      QQK+  +I      +E    +V++ D + ++ + N K
Sbjct: 221 DELGRVTDAINQMRERLNADMERQQKDAAEIRKFSKAIEQSPSSVLICDRQWRIEFANQK 280

Query: 334 AETLLEVASSNAVGESLASL------LKAGEQLNQAV-FHCIRLGETMPQVAKIKLLTTM 386
              L    +++ +G+   +L       +    L Q++     R+G    +V  ++     
Sbjct: 281 FTQLTGYEAASIIGKHPGALGDNDIENRDSRHLWQSIRLQVQRVGVWQGEVNSVR--RNG 338

Query: 387 PRIIERSISNVLNHEKE-IVGTVVVLRDITQEELLKHQLQKRANFDGITGLLNRQAFEEQ 445
            R  E+ I   +  E     G +++  DI+  +  + QL ++AN+D +TGL NR    ++
Sbjct: 339 ERFWEQLIVTPIKDEAGGTTGYLILGEDISIRKRYEQQLLRQANYDILTGLPNRMLALDR 398

Query: 446 LPEFASQARS----LAVCYLDLEQFKLINDSCGHTAGDRMLAMVARAIQSCLGPQELLAR 501
           L    +QAR     + V +LDL+ FK IND+ GH AGD +L   AR I SCL     +AR
Sbjct: 399 LKLALAQARRESTLVGVMFLDLDNFKHINDTLGHDAGDNLLIEAARRISSCLRGTSTVAR 458

Query: 502 IGGDEFGLVICDRTAL-AVAQLLKQIIAQVSLQVLHDKNCNYKVGLSIGVAFGRAPYINA 560
           +GGDEF +++   T   A +Q+ ++I+   S   + +    + V  SIG+A       N+
Sbjct: 459 LGGDEFLVILPGLTGPEASSQVAERILKTFSPPYILNGQEVF-VTTSIGIAIFPTDSDNS 517

Query: 561 QELLKDADIACIAAKAKGTNQIHIYDDKDKELTYQRNAPKWAVRIAQAIEENELLLYYQP 620
             LL+ AD A   AK KG +    +  +  E++++R   + ++R  +A+E  E  LY+QP
Sbjct: 518 GTLLQHADAAMYQAKHKGKSSFAHFAPEMTEVSHERLKMESSMR--RALELKEFELYFQP 575

Query: 621 IRGLGASSKRQRMEVLLRIQEPCGRILAPAQFIAAAERFKLMPEIDK----EVIRKAFLW 676
           I    + +    +E LLR   P   ++ P +FI  AE   L+  I +    E  R A  W
Sbjct: 576 IVNTDSGTLCS-VEALLRWNNPAMGMVMPDRFIPLAEETGLITPIGEWVLLEACRAAMGW 634

Query: 677 LSLNSQLWQDHCISINLSGNSLGAEGMVEYIAKQQQIFDIPSQCVCFEITETTAIQNRHR 736
                +   D  IS+N+S       G  E +        +  + +  EITE   + N   
Sbjct: 635 KEATGK---DIGISVNVSPRQFRDPGFTEAVMHALATSGLAPEQLELEITERLILDNSIE 691

Query: 737 GMEMLRQLRKLGFSFALDDFGSGFASYGYLRELPVDYVKIDGCFVKNLAVNAKDYAIVKS 796
             E+LRQL K G   ++DDFG+G+++  YL+  P D +KID  FV+++    +D ++V++
Sbjct: 692 TAEILRQLDKAGIRLSVDDFGTGYSALSYLKSYPFDTLKIDKSFVQDVMKEPEDASLVRA 751

Query: 797 IQDVCRVMGIETVAEFVENQEIIDRLQTIGINYAQGYAIGRPQPLASY 844
           I ++   +G+  +AE VE +     L+  G +++QGY   RP P A +
Sbjct: 752 IINMAHSLGLRVIAEGVEEEAQTHFLKKEGCDFSQGYFYSRPLPAADF 799