Pairwise Alignments

Query, 161 a.a., regulator of sigma D (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 164 a.a., Rsd/AlgQ family anti-sigma factor from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (334), Expect = 2e-36
 Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 2/152 (1%)

Query: 1   MLRELEKAEQKWGGSNKLIDQWLENRRKLLVHYCQIAGLPPYTN--AEKSLPSFEHVKSF 58
           MLR+ +  +++WGGS+ +ID WL+ R+ ++V YC++A L P T   A   LPS + +  F
Sbjct: 3   MLRKFKNVQEQWGGSSDIIDHWLDKRQHVIVEYCKLAALQPCTTKAAVSELPSPQALLYF 62

Query: 59  CDLLVDYVSEGHFEVYDQVINACEKFGAPCKAAIQQVLPKITPTTNAALDFNDKYAETQD 118
           C  LVDY+SEGHF++YD V++     G      I QV  KI  TT   L+FND+YA   +
Sbjct: 63  CQELVDYISEGHFKIYDMVMDKWHATGFKATDEINQVYGKIVATTEPLLNFNDQYATVTE 122

Query: 119 DQVLYQLDKDLSELAHTMETRFELEDKLLEVL 150
              L  LD+DLS++   +E RF LED+L++++
Sbjct: 123 YDELLDLDRDLSKVGEVLELRFSLEDQLIQLI 154