Pairwise Alignments

Query, 161 a.a., regulator of sigma D (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 159 a.a., anti-RNA polymerase sigma 70 factor from Marinobacter adhaerens HP15

 Score =  124 bits (310), Expect = 9e-34
 Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 4/156 (2%)

Query: 1   MLRELEKAEQKWGGSNKLIDQWLENRRKLLVHYCQIAGLPPYTNAEKSLPSFEHVKSFCD 60
           ML     A ++WGG ++LID+WL+ R++LLVHYC ++G   ++  E     F  +   C+
Sbjct: 1   MLENCRNARERWGGVSELIDRWLKERQELLVHYCDLSGESDFSQTEALREKFVRL---CE 57

Query: 61  LLVDYVSEGHFEVYDQVINACEKFGAPCKAAIQQVLPKITPTTNAALDFNDKY-AETQDD 119
           +LVDYVS GHFE+Y+Q++    +F         +V P+I  TT  AL+FND+       +
Sbjct: 58  VLVDYVSTGHFEIYEQLVREAREFNDGGLELAAKVYPRIEQTTEVALNFNDRLDGRDLSE 117

Query: 120 QVLYQLDKDLSELAHTMETRFELEDKLLEVLHSKYS 155
           + + +L  +LS+L  T+ETRFE+ED L+E LH+ ++
Sbjct: 118 EDVKELFGELSKLGETLETRFEMEDFLIEHLHNAHA 153